[R-sig-ME] lmer nonconvergent: care to run and explain?
Douglas Bates
bates at stat.wisc.edu
Fri Oct 16 20:35:40 CEST 2015
For those who may be interested, these are the results of timing the fits
of two models on these simulated data. For consistency within the timings
I have renamed the grouping factor Mind to G and named the three continuous
covariates as S, T and U. The optimizers whose names start with LN_ are
timings from the Julia MixedModels package using the NLopt package for
optimization. Those whose names start with NLOPT_LN_ are the same
optimizer code accessed through the nloptr package for R. The others are
from the optimx package, bobyqa from the minqa package (the default for
lmer) and the build-in Nelder_Mead optimizer, which is generally pretty bad
and I can say that because I wrote it.
dsname = "paulsim"
form = Formula: Y ~ 1 + S + T + U + (1 | G) + ((0 + S) | G)
-2log(likelihood) time(s) feval geval optimizer
143232.6341 1.5120 606 0 bobyqa
143564.1597 0.2770 70 0 Nelder_Mead
143232.9465 0.2680 66 0 NLOPT_LN_BOBYQA
143272.7444 0.2430 53 0 NLOPT_LN_COBYLA
143803.9823 0.3420 40 0 NLOPT_LN_NELDERMEAD
143232.6341 0.4570 147 0 NLOPT_LN_SBPLX
143232.6582 0.6320 58 0 optimx:L-BFGS-B
143232.6341 0.5480 104 0 optimx:nlminb
143232.6341 6.7930 NA 0 optimx:spg
143232.6341 1.6930 NA 0 optimx:bobyqa
143232.6341 0.0489 107 0 LN_BOBYQA
143232.6382 1.9885 69711 0 LN_COBYLA
143803.9823 0.0474 56 0 LN_NELDERMEAD
143232.6341 0.0527 147 0 LN_SBPLX
form = Formula: Y ~ 1 + S + T + U + ((0 + S) | G)
-2log(likelihood) time(s) feval geval optimizer
143232.6341 0.1400 41 0 bobyqa
143232.6341 0.1510 49 0 Nelder_Mead
143232.6343 0.1360 36 0 NLOPT_LN_BOBYQA
143232.6503 0.1170 24 0 NLOPT_LN_COBYLA
143232.6341 0.1540 48 0 NLOPT_LN_NELDERMEAD
143232.6341 0.1900 74 0 NLOPT_LN_SBPLX
143232.6368 0.3560 70 0 optimx:L-BFGS-B
143232.6341 0.2470 29 0 optimx:nlminb
143232.6341 0.3660 NA 0 optimx:spg
143232.6341 0.2650 NA 0 optimx:bobyqa
143232.6341 0.0240 43 0 LN_BOBYQA
143232.6341 0.0240 34 0 LN_COBYLA
143232.6341 0.0242 52 0 LN_NELDERMEAD
143232.6341 0.0246 81 0 LN_SBPLX
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