[R-sig-ME] glmm question
Joaquín Aldabe
joaquin.aldabe at gmail.com
Wed May 13 23:12:14 CEST 2015
Hello, this is Joaquín Aldabe from Uruguay. I´m trying to model shorebird
counts (Buff breasted Sandpiper, BBSA) with glmm (using lme4 package),
using continuous variables (grass height, field area, forest cover) and one
factor variable (presence/absence of other shorebird species: American
Golden Plover, AMGP). I sampled 19 fields during three years in December.
I´m interested in identifying predictors correlated with BBSA counts. I
used Year as a random effect as I´m not interested in Year as a fix effect
and because fields were counted three times (pseudoreplication).
The model doesn´t converge, and the output showed that the factorial
variable has not a significant effect. This is weird as in every field I
observed the Buff breasted Sandpiper I also observed the other
species. When I take AMGP out, the model runs ok.
This is the model I´m trying to run:
mysub3.3<-glmer(BBSA~Grass_height+Field_area+Field_enclosure_700m+Grass_height*Field_enclosure_700m+fAMGP+(1|fYear),family="poisson",
data=mysub3.2)
continuous variables were scaled.
I can send de data frame if somebody is interested.
Thanks in advanced for helping me on my master thesis.
Cheers,
Joaquín.
--
*Joaquín Aldabe*
*Grupo Biodiversidad, Ambiente y Sociedad*
Centro Universitario de la Región Este, Universidad de la República
Ruta 15 (y Ruta 9), Km 28.500, Departamento de Rocha
*Departamento de Conservación*
Aves Uruguay
BirdLife International
Canelones 1164, Montevideo
https://sites.google.com/site/joaquin.aldabe
<https://sites.google.com/site/perfilprofesionaljoaquinaldabe>
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