[R-sig-ME] R2 for Negative Binomial calculated with GLMMADMB
Jens Oldeland
fbda005 at uni-hamburg.de
Wed Dec 17 16:18:13 CET 2014
Dear List-members,
recently, the R2 calculations for GLMMs invented by Schielzieth and
Nakagawa 2012 [1] were implemented into the MuMIn package. This is
incredibly good news, as many colleagues still require R2 to understand
a model output. I invested 2 weeks in lengthy calculations of about 20
negative binomial GLMMs using the glmmADMB package. Now, my colleagues
want the R2 (me too), however, sadly, the MuMIn functions do only work
for binomial and poisson GLMMS. Further, it seems that the functions do
not recognize the glmmADMB package but prefer (g)lmer output.
Now my question: Does anybody of you know if this is "easy" to implement
and if so "how"? I tried to redo the code provided here (actually posing
the same question) but failed...:
http://stats.stackexchange.com/questions/109215/r%C2%B2-squared-from-a-generalized-linear-mixed-effects-models-glmm-using-a-negat
Or does anybody know if in the near future (this year?) it will be
implemented somewhere?
Is it possible to transform a GLMMADMB object into an lmer object?
Any hints are most welcome,
merry Xmas
Jens
[1] Nakagawa, S., & Schielzeth, H. (2013). A general and simple method
for obtaining R2 from generalized linear mixed-effects models./Methods
in Ecology and Evolution/,/4/(2), 133-142.
--
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Dr. Jens Oldeland
Post-Doc Researcher & Lecturer @ BEE
Managing Editor - Biodiversity & Ecology
Biodiversity, Ecology and Evolution of Plants (BEE)
Biocentre Klein Flottbek and Botanical Garden
University of Hamburg
Ohnhorststr. 18
22609 Hamburg,
Germany
Tel: 0049-(0)40-42816-407
Fax: 0049-(0)40-42816-543
Mail: jens.oldeland at uni-hamburg.de
Oldeland at gmx.de
Skype: jens.oldeland
http://www.biologie.uni-hamburg.de/bzf/fbda005/fbda005.htm
http://www.biodiversity-plants.de/biodivers_ecol/biodivers_ecol.php
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