[R-sig-ME] error message using glmmADMB
Nagata Mizuho
mizuho19901116 at yahoo.co.jp
Thu Nov 6 09:06:01 CET 2014
Dear members,
I am trying to fit a glmmADMB model on my data, but altough I tried to fix
it after reading many tutorials and forums, I couldn't do it.
I use R version 3.0.2 and glmmADMB version 0.8.0.
The model looks like this:
modelA<-glmmadmb(F_sumtime~posi+(1|No),family="gamma",link="log",data=act,zeroInflation=TRUE)
This is my data.
'data.frame': 5354 obs. of 3 variables:
$ No : Factor w/ 8 levels "B22","B36","B41",..: 1 1 1 1 1 1 1 1 1 1 ...
$ posi : Factor w/ 6 levels "1","2","3","4",..: 1 1 1 1 1 1 1 1 1 1 ...
$ F_sumtime: num 70 60 60.5 60 170.5 ...
This is the error messege.
glmmadmb(f_sumtime_h ~ posi + (1 | No), family = "gamma", link = "log", :
The function maximizer failed (couldn't find STD file) Troubleshooting steps include
(1) run with 'save.dir' set and inspect output files;
(2) change run parameters: see '?admbControl'
-maxfn 500 -maxph 5 -noinit -shess' had status 1
Incompatible bounds in dvar_vector& dvar_vector::operator = (const dvar_vector& t)
So, I run with 'save.dir' like this:
modelA<-glmmadmb( F_sumtime~posi+(1|No),family="gamma",link="log",data=act,zeroInflation=TRUE,save.dir="act3",admb.opts=admbControl(run=FALSE))
The error message is here:
'run=FALSE' specified, STD file not found: stopping
I got a act3 directory and run ADMB from terminal.
But I couldn't get the result.
Any idea of what is wrong?
Thanks in advance!
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