[R-sig-ME] multivariate MCMCglmm problem

David Duffy David.Duffy at qimr.edu.au
Wed May 22 02:29:55 CEST 2013


On Tue, 21 May 2013, Raphael Royaute wrote in response to Thomas Merkling:

> For alternatives to Bayesian approaches with multivariate MM, I only know
> of ASReml, which you can install for free on windows OS.

Aside from ASReml, there are a few free R and non-R programs that can be 
used to fit a multi-trait mixed model (I reckon it is always nice to get 
two different packages to give the same answer :)). These include:

Sabre (http://sabre.lancs.ac.uk/) and
RSabre (http://sabre.lancs.ac.uk/sabreRuse_intro.html)

Wombat (http://didgeridoo.une.edu.au/km/wombat.php)

MatVec (perhaps http://statistics.unl.edu/faculty/steve/software/matvec/)

DMU (http://www.dmu.agrsci.dk/)

Mendel (http://www.genetics.ucla.edu/software/mendel)

The last four are genetics packages, but they will happily run this 
problem.

| David Duffy (MBBS PhD)                                         ,-_|\
| email: davidD at qimr.edu.au  ph: INT+61+7+3362-0217 fax: -0101  /     *
| Epidemiology Unit, Queensland Institute of Medical Research   \_,-._/
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