[R-sig-ME] Resume terminated lmer fit if verbose=TRUE?

Hans Ekbrand hans at sociologi.cjb.net
Tue Aug 30 10:07:25 CEST 2011


On Wed, Jul 27, 2011 at 03:39:59PM -0300, Mike Lawrence wrote:
> Thanks to Harold for pointing out the start argument and indicating
> that the verbose output can be supplied as its value. 

Hi Mike,

I am just about to restart an interation that did not converge on 300
iterations. I have saved both the fit-object and the output of
glmer(verbose=TRUE). I don't really get how to format the input to the
start value parameter. Does it suffice to provide the last iteration
as a character string? Here is what I got for the last iteration:

300:     83537.084: 0.519965 0.143416 0.510886 0.390266 0.0253851 0.228085  0.00000  0.00000 0.175437 0.167589 0.000151413 0.257648  0.00000  0.00000  0.00000  0.00000  0.00000  0.00000  0.00000 0.662743 0.697672 0.0943584 0.238029 0.465242 0.264901 0.177211 -0.255314 0.297930 -0.0908047 0.234670 0.232733 0.0640540 0.0191507 -0.207110 0.370959 0.639145 0.275867 -1.61519  1.14158 -0.519320 -0.0995158 -0.00705858 -0.495069 -0.995847 -0.259104 -0.751779 -0.613690 -0.281145 -0.633951 -0.128201 -2.07103  2.11410 0.817327  1.09840 0.287138 -0.699452 0.511890 -0.227955 0.293735 0.443935 -0.107533 -0.159424 -0.380081 -0.0856487 0.271927 -0.419327 0.200206 0.0556932 -0.373988 0.219712  1.11540 -0.204753 -0.250565 0.227195 0.338191 0.0638902 0.381680 0.347678 0.656791 0.610805 0.286053 0.387693 0.0700578 0.311415 0.216640 -1.43990  8.21723 -0.0677624 -1.82260  1.98123  8.53073 -1.47762  4.62704  9.22425  16.0583  9.00298 0.610718  6.34499 0.114604 -0.268301 0.659427 0.0675373 0.223978 -0.314364 0.242165 -0.0398588 0.00348154 0.390582 0.205796 0.314690 -0.0210720 0.359508 0.0102215 0.0133513 -0.0249899 0.00303007 0.00104005 -0.00199693 -0.0162271 -0.00910787 -0.000721493 -0.00571186 -0.0221484 0.00132736 -0.00938054 -0.0559509 0.000625754 -0.0151419 -0.0342182 -0.0301707 -0.00874410 -0.0166841 -0.0118311 -0.0150344 -0.0455952 0.334382  1.62474 0.592823 -0.0838088 -0.0622300 -0.0477605 0.568942 -0.379506 -0.957889 -0.671352 -0.158491 -0.330145 0.269097 -0.316426 -1.04228 0.196337 -0.639169 -0.646029 -0.246746  1.11005  1.86385 0.428263  3.28910 0.565427 -0.285010 0.206211 -0.353546 0.913265 -0.534973 0.445224 -1.18672 -0.372053 -0.804367 -0.418456 -0.681271 0.0606201 0.0683290 0.685260 0.201087 -0.736270 -0.444255 -0.509914 -0.286142 -0.484370 -0.395121 -0.482115 0.300839 -0.444407 -0.444848 -0.0528026 -0.751176 0.670575 -0.0569850 -0.0616133 0.343210 -3.71098  1.26284  1.37018  1.13882  1.86587  1.14523  1.35873  1.81718  2.69451  2.54993  1.81382  1.97416  2.14052  1.94535 0.989847  2.04325  3.65850  1.65551  3.04955

Or do you have to format it in any way? How did you do it?

Kind regards,

Hans Ekbrand




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