[R-sig-ME] Sorry, I meant: Modelling INTERspecific differences with random slopes
David R.
drbn at yahoo.com
Fri Oct 30 22:02:08 CET 2009
Sorry for my poor English in the previous message, I meant INTERspecific differences, not INTRAspecific. This is the corrected question:
Hi,
I'm using mixed models (lme4 package) to analyze variability in 13 SPECIES of birds observed during 15 YEARS across 5 sites. All the species were observed in all the sites in most YEARS.
My initial model was:
response ~ a + b + c + d + e + (1 | YEAR) + (1 | SITE) + (1 | SPECIES)
that after some LRT was simplified to:
response ~ a + b + c + d + e + (1 | SPECIES)
I was not interested in these species in their own right and treated them as being representative members of a population of similar species. But now I was asked about the possible interspecific differences in the effect of a, b, c, d and e on the response.
My question is: Is it appropriate a model of random intercept and slopes as initial full model to estimate these differences?
For example:
response ~ a + b + c + d + e + (1 | YEAR) + (1 | SITE) + (1 | SPECIES) + (1 + a | SPECIES) + (1 + b | SPECIES) + (1 + c | SPECIES) + (1 + d | SPECIES) + (1 + e | SPECIES)
Or perhaps is it more appropriate to work with species as fixed effects like:
response ~ (a + b + c + d + e) * SPECIES + (1 | YEAR) + (1 | SITE)
Thanks in advance
David
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