[R-sig-ME] syntax for indicating fixed covariates in nlmer ?
Laurent Gentzbittel
gentz at ensat.fr
Tue Mar 10 16:56:56 CET 2009
Dear all,
I would like to use the nlmer for fitting logistic curves to disease
index curves. I'm typically comparing different plant lines (several
plants from each line are subjected to a pathogen) and would like to
test if the 'population' (fixed effects) parameters of the curves are
the same between the lines.
I need to specify a random effect for each parameter to account for
plant-to-plant variability and a fixed effect for some parameter to
account for 'general' differences among lines.
I previously used the nlme function of the nlme package and was able to
specify both fixed and random effects for each parameter, including a
fixed covariate 'line' for example.
I would like to switch to the lme4 package, but I was unable to find how
to specify fixed covariates (fixed effects) in the formula.
A search in the different mail lists and Googl'ing was also unsuccessful.
Does anybody knows how to write it ?
Regards
--
Prof. L. GENTZBITTEL Phone: +33 (0)5 62 19 35 96
INP - ENSAT Fax : +33 (0)5 62 19 35 89
Symb. & Path. Plantes - IFR40
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31326 CASTANET TOLOSAN - FRANCE
E-mail: gentz at ensat.fr
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