[R-sig-ME] Lmer with family = quasipoisson
Renwick, A. R.
a.renwick at abdn.ac.uk
Mon Aug 25 17:46:56 CEST 2008
I was wondering if anybody could explain why an AIC can be calucluated for a lmer model with a quasi poisson distriution and not a glm.
I have also found that the AIC's are extremely sensitive in the lmer model, for example removing a term with very low t-values resulted in an increase in AIC of 284.
Many thanks,
Anna
MODEL1:
mix<-lmer(realdis~sex+width+sess+sex:width+sex:sess+sess:width+(1|site),family=quasipoisson,data=move,subset=-52)
> summary(mix)
Generalized linear mixed model fit by the Laplace approximation
Formula: realdis ~ sex + width + sess + sex:width + sex:sess + sess:width + (1 | site)
Data: move
Subset: -52
AIC BIC logLik deviance
11019 11117 -5490 10979
Random effects:
Groups Name Variance Std.Dev.
site (Intercept) 9.1673 3.0278
Residual 76.4532 8.7438
Number of obs: 976, groups: site, 14
Fixed effects:
Estimate Std. Error t value
(Intercept) 2.76589 0.91021 3.0387
sexm 0.17425 0.41856 0.4163
widthn 0.26750 0.99495 0.2689
widthw -0.47361 0.55549 -0.8526
sess2 -0.43403 0.64479 -0.6731
sess3 -0.16228 0.85141 -0.1906
sess4 -0.40075 0.63427 -0.6318
sexm:widthn 0.78322 0.63070 1.2418
sexm:widthw 0.39836 0.44387 0.8975
sexm:sess2 0.02061 0.51386 0.0401
sexm:sess3 0.17900 0.52713 0.3396
sexm:sess4 0.36188 0.53644 0.6746
widthn:sess2 0.53589 0.83917 0.6386
widthw:sess2 -0.11500 0.65798 -0.1748
widthn:sess3 -0.19799 1.03927 -0.1905
widthw:sess3 -0.99033 0.86773 -1.1413
widthn:sess4 -0.17498 0.94033 -0.1861
widthw:sess4 -1.03199 0.75236 -1.3717
REMOVE WIDTH:SESS INTERACTION
mix1<-lmer(realdis~sex+width+sess+sex:width+sex:sess+(1|site),family=quasipoisson,data=move,subset=-52)
> summary(mix1)
Generalized linear mixed model fit by the Laplace approximation
Formula: realdis ~ sex + width + sess + sex:width + sex:sess + (1 | site)
Data: move
Subset: -52
AIC BIC logLik deviance
11303 11372 -5638 11275
Random effects:
Groups Name Variance Std.Dev.
site (Intercept) 6.8207 2.6117
Residual 84.5884 9.1972
Number of obs: 976, groups: site, 14
Fixed effects:
Estimate Std. Error t value
(Intercept) 3.0503 0.7807 3.907
sexm 0.1780 0.4249 0.419
widthn 0.1302 0.7417 0.176
widthw -0.7784 0.5217 -1.492
sess2 -0.4633 0.4770 -0.971
sess3 -0.9002 0.4859 -1.853
sess4 -0.9513 0.4733 -2.010
sexm:widthn 0.7431 0.6553 1.134
sexm:widthw 0.3856 0.4592 0.840
sexm:sess2 0.0963 0.5314 0.181
sexm:sess3 0.2302 0.5511 0.418
sexm:sess4 0.3524 0.5481 0.643
Change in AIC = 11303 - 11019 = an increase of 284
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