[R-sig-ME] Error message from nlmer
Kari Ruohonen
kari.ruohonen at utu.fi
Tue Oct 30 10:48:19 CET 2007
I apologise that I re-post this question but I just learnt about this
specific mixed model list, and since I got no replies from r-help I
thought there may be people able to help on this list that are not
reading the main r-help.
Once more my sincere apologies if someone feels this is misuse of the
list. I would appreciate very much any hints to solve the problem
described below since I am totally puzzled.
-------- Forwarded Message --------
From: Kari Ruohonen <kari.ruohonen at utu.fi>
To: r-help at r-project.org
Subject: Error message from nlmer
Date: Thu, 25 Oct 2007 15:31:46 +0300
Hi,
I have R 2.6.0 with updated lme4 and Matrix packages, and I am trying to
fit a nonlinear multilevel model. I get the following error message:
Error in nlmer(f ~ grModel(x, w, Tmin, Tmax, Topt, kopt, m) ~ kopt |
flat, :
gradient attribute of evaluated model must be a numeric matrix
and I wonder what this may indicate.
The nonlinear model I try to fit is as follows:
> grModel
function(x,w,Tmin,Tmax,Topt,kopt,m)((x-Tmin)*(x-Tmax))/((x-Tmin)*(x-Tmax)-(x-Topt)^2)*kopt*w^m
and my call of nlmer is as follows:
nlmr1<-nlmer(feed~grModel(temp,MW,Tmin,Tmax,Topt,kopt,m)~kopt|
flat,data=egi,start=c(Tmin=0.2,Tmax=21.1,Topt=14.6,kopt=2.5,m=.51))
'flat' is a factor with 11 levels.
My start values are from nls that fits the model with no errors. The
call I have used is as follows:
nls1<-nls(feed~grModel(temp,MW,Tmin,Tmax,Topt,kopt,m),data=egi,start=c(Tmin=1,Tmax=20,Topt=13,kopt=3,m=.7))
The examples given on the help page of nlmer run with no errors.
I would appreciate any hints and help to track the problem indicated by
the error message.
Thanks,
Kari
More information about the R-sig-mixed-models
mailing list