[R-meta] Testing of moderators in rma()
Samuel Knapp
samuel.knapp at tum.de
Tue Oct 24 22:55:03 CEST 2017
Dear all,
I have a problem in finding the right test for the inclusion of
moderators, or actually I'm not sure if I should include the intercept
term or not. What troubles me, is that the removal of the intercept
term, has a very big effect on the omnibus test of the moderators.
The model: rma.mv() with an additional random effect (study), a
variance-covariance matrix for the sampling variances and covariances
(Lajeunesse correction).
I want to test species as a moderator. When I include the intercept, the
moderator effect is not significant (P=0.2779), and when I remove the
intercept P<0.001. I started to remove the intercept to get the average
effects for levels for each species and the z-test for each species.
However, no I'm not sure anymore, what the different interpretation of
moderator test for the two different models are.
Thanks a lot!
### Model with intercept:
> specmodel <-
rma.mv(yi~species,V=varmat,random=~1|study/myo,data=metadat,method="REML")
> summary(specmodel)
Multivariate Meta-Analysis Model (k = 166; method: REML)
logLik Deviance AIC BIC AICc
12.8545 -25.7089 22.2911 93.5666 32.3751
Variance Components:
estim sqrt nlvls fixed factor
sigma^2.1 0.0216 0.1470 39 no study
sigma^2.2 0.0300 0.1732 166 no study/myo
Test for Residual Heterogeneity:
QE(df = 144) = 1386.5618, p-val < .0001
Test of Moderators (coefficient(s) 2:22):
QM(df = 21) = 24.3187, p-val = 0.2779
### Model without intercept:
> specmodel <-
rma.mv(yi~species-1,V=varmat,random=~1|study/myo,data=metadat,method="REML")
> summary(specmodel)
Multivariate Meta-Analysis Model (k = 166; method: REML)
logLik Deviance AIC BIC AICc
12.8545 -25.7089 22.2911 93.5666 32.3751
Variance Components:
estim sqrt nlvls fixed factor
sigma^2.1 0.0216 0.1470 39 no study
sigma^2.2 0.0300 0.1732 166 no study/myo
Test for Residual Heterogeneity:
QE(df = 144) = 1386.5618, p-val < .0001
Test of Moderators (coefficient(s) 1:22):
QM(df = 22) = 61.9539, p-val < .0001
--
Samuel Knapp
Lehrstuhl für Pflanzenernährung
Technische Universität München
(Chair of Plant Nutrition
Technical University of Munich)
Emil-Ramann-Strasse 2
D-85354 Freising
Tel. +49 8161 71-3578
samuel.knapp at tum.de
www.researchgate.net/profile/Samuel_Knapp
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