[Session started at 2005-07-15 14:34:23 -0500.] 2005-07-15 14:34:24.499 R[7474] [GlobalExHandler.init - ready to track exceptions] 2005-07-15 14:34:25.860 R[7474] CFLog (0): CFMessagePort: bootstrap_register(): failed 1103 (0x44f), port = 0x3803, name = 'org.R-project.R.ServiceProvider' See /usr/include/servers/bootstrap_defs.h for the error codes. 2005-07-15 14:34:26.012 R[7474] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (org.R-project.R.ServiceProvider) 2005-07-15 14:34:27.055 R[7474] RController.awakeFromNib 2005-07-15 14:34:27.058 R[7474] - load preferences 2005-07-15 14:34:27.059 R[7474] RController.updatePreferences 2005-07-15 14:34:27.063 R[7474] - releasing "Monaco 10.00 pt. P [] (0x04313c70) fobj=0x011ce8a0, spc=6.00" 2005-07-15 14:34:27.064 R[7474] - using new "Monaco 10.00 pt. P [] (0x04313c70) fobj=0x011ce8a0, spc=6.00" 2005-07-15 14:34:27.065 R[7474] - done, preferences updated 2005-07-15 14:34:27.065 R[7474] - init R_LIBS 2005-07-15 14:34:27.065 R[7474] - set APP VERSION 2005-07-15 14:34:27.066 R[7474] - set R home 2005-07-15 14:34:27.066 R[7474] - set locale 2005-07-15 14:34:27.068 R[7474] - setting LANG=en_US.UTF-8 2005-07-15 14:34:27.068 R[7474] - init R 2005-07-15 14:34:27.069 R[7474] - font and other widgets 2005-07-15 14:34:27.206 R[7474] - setup timer 2005-07-15 14:34:27.209 R[7474] - setup stdout/err grabber 2005-07-15 14:34:27.219 R[7474] - set cwd and load history 2005-07-15 14:34:27.221 R[7474] RController.doLoadHistory 2005-07-15 14:34:27.222 R[7474] - history file to load: .Rhistory 2005-07-15 14:34:27.223 R[7474] - did NOT clear history, append with: .Rhistory 2005-07-15 14:34:27.248 R[7474] - awake is done 2005-07-15 14:34:27.668 R[7474] Trouble registering connection CPNoteBook R Channel. 2005-07-15 14:34:27.829 R[7474] RController.applicationDidFinishLaunching 2005-07-15 14:34:27.830 R[7474] - initalizing R 2005-07-15 14:34:27.831 R[7474] REngine.activate: starting R ... 2005-07-15 14:34:31.518 R[7474] REngine.activate: R started with no error 2005-07-15 14:34:31.519 R[7474] - set R options 2005-07-15 14:34:31.520 R[7474] REngine.executeString:"options(htmlhelp=TRUE)" 2005-07-15 14:34:31.533 R[7474] RController.setStatusLine: "executing: options(htmlhelp=TRUE)" 2005-07-15 14:34:31.546 R[7474] RController.setStatusLine: "Loading R ..." 2005-07-15 14:34:31.547 R[7474] - success: YES 2005-07-15 14:34:31.548 R[7474] - set default CRAN mirror 2005-07-15 14:34:31.549 R[7474] REngine.executeString:"try({ r <- getOption('repos'); r['CRAN']<-gsub('/$', '', "http://www.biometrics.mtu.edu/CRAN"); options(repos = r) },silent=TRUE)" 2005-07-15 14:34:31.563 R[7474] RController.setStatusLine: "executing: try({ r <- getOption('repos'); r['CRAN']<-gsub('/$', '', "http://www.biometrics.mtu.edu/CRAN"); options(repos = r) },silent=TRUE)" 2005-07-15 14:34:31.613 R[7474] RController.setStatusLine: "Loading R ..." 2005-07-15 14:34:31.614 R[7474] - success: YES 2005-07-15 14:34:31.615 R[7474] - clean up and flush console 2005-07-15 14:34:31.693 R[7474] - setup notification and timers 2005-07-15 14:34:31.694 R[7474] - show main window 2005-07-15 14:34:31.701 R[7474] - setup REPL trigger timer 2005-07-15 14:34:31.703 R[7474] - done, ready to go 2005-07-15 14:34:31.902 R[7474] RController.setStatusLine: "" 2005-07-15 14:34:49.404 R[7474] Preferences.setKey:"Input Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833f 3cf4b083 3f76ea58 010186>" 2005-07-15 14:34:49.416 R[7474] RController.updatePreferences 2005-07-15 14:34:49.418 R[7474] - done, preferences updated 2005-07-15 14:34:59.061 R[7474] Preferences.setKey:"Output Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 66660101 010186>" 2005-07-15 14:34:59.066 R[7474] RController.updatePreferences 2005-07-15 14:34:59.067 R[7474] - done, preferences updated 2005-07-15 14:35:00.315 R[7474] Preferences.setKey:"Output Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 66660183 3f7ef410 833e77c7 500186>" 2005-07-15 14:35:00.323 R[7474] RController.updatePreferences 2005-07-15 14:35:00.324 R[7474] - done, preferences updated 2005-07-15 14:35:01.996 R[7474] Preferences.setKey:"Output Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 66660183 3f75c853 833ecef3 700186>" 2005-07-15 14:35:02.001 R[7474] RController.updatePreferences 2005-07-15 14:35:02.002 R[7474] - done, preferences updated 2005-07-15 14:35:07.670 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 140186>" 2005-07-15 14:35:07.675 R[7474] RController.updatePreferences 2005-07-15 14:35:07.707 R[7474] - done, preferences updated 2005-07-15 14:35:09.385 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f42 79a386>" 2005-07-15 14:35:09.390 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f42 79a386>" 2005-07-15 14:35:09.391 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:09.395 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f42 79a386>" 2005-07-15 14:35:09.396 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:09.400 R[7474] RController.updatePreferences 2005-07-15 14:35:09.448 R[7474] - done, preferences updated 2005-07-15 14:35:09.581 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f42 79a386>" 2005-07-15 14:35:09.588 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f42 79a386>" 2005-07-15 14:35:09.589 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:09.594 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f42 79a386>" 2005-07-15 14:35:09.596 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:09.600 R[7474] RController.updatePreferences 2005-07-15 14:35:09.662 R[7474] - done, preferences updated 2005-07-15 14:35:10.768 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:10.773 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:10.774 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:10.778 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:10.778 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:10.783 R[7474] RController.updatePreferences 2005-07-15 14:35:10.817 R[7474] - done, preferences updated 2005-07-15 14:35:10.876 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:10.881 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:10.882 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:10.888 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:10.889 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:10.893 R[7474] RController.updatePreferences 2005-07-15 14:35:10.950 R[7474] - done, preferences updated 2005-07-15 14:35:12.344 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:12.350 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:12.351 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:12.355 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:12.355 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:12.360 R[7474] RController.updatePreferences 2005-07-15 14:35:12.416 R[7474] - done, preferences updated 2005-07-15 14:35:12.514 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:12.519 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:12.520 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:12.524 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f52 087c86>" 2005-07-15 14:35:12.525 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:12.528 R[7474] RController.updatePreferences 2005-07-15 14:35:12.560 R[7474] - done, preferences updated 2005-07-15 14:35:14.024 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f68 a9b986>" 2005-07-15 14:35:14.029 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f68 a9b986>" 2005-07-15 14:35:14.030 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:14.034 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f68 a9b986>" 2005-07-15 14:35:14.034 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:14.038 R[7474] RController.updatePreferences 2005-07-15 14:35:14.071 R[7474] - done, preferences updated 2005-07-15 14:35:14.218 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f68 a9b986>" 2005-07-15 14:35:14.223 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f68 a9b986>" 2005-07-15 14:35:14.224 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:14.228 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f68 a9b986>" 2005-07-15 14:35:14.229 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:14.232 R[7474] RController.updatePreferences 2005-07-15 14:35:14.265 R[7474] - done, preferences updated 2005-07-15 14:35:14.904 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f68 a9b986>" 2005-07-15 14:35:14.909 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f68 a9b986>" 2005-07-15 14:35:14.909 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:14.913 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f68 a9b986>" 2005-07-15 14:35:14.914 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:14.919 R[7474] RController.updatePreferences 2005-07-15 14:35:14.951 R[7474] - done, preferences updated 2005-07-15 14:35:15.223 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f67 3fa586>" 2005-07-15 14:35:15.228 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f67 3fa586>" 2005-07-15 14:35:15.229 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:15.233 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f67 3fa586>" 2005-07-15 14:35:15.234 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:15.238 R[7474] RController.updatePreferences 2005-07-15 14:35:15.295 R[7474] - done, preferences updated 2005-07-15 14:35:15.698 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f67 3fa586>" 2005-07-15 14:35:15.703 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f67 3fa586>" 2005-07-15 14:35:15.704 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:15.708 R[7474] Preferences.setKey:"Background Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e d9c61483 3ed9c614 833ed9c6 14833f67 3fa586>" 2005-07-15 14:35:15.709 R[7474] Preferences.notifyDependents: WARNING, cascaded notify attempted while is being notified! Notify request cancelled. 2005-07-15 14:35:15.712 R[7474] RController.updatePreferences 2005-07-15 14:35:15.745 R[7474] - done, preferences updated 2005-07-15 14:35:19.236 R[7474] Preferences.setKey:"Stdout Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833d d932c083 3f000180 833e1121 9c0186>" 2005-07-15 14:35:19.241 R[7474] RController.updatePreferences 2005-07-15 14:35:19.276 R[7474] - done, preferences updated 2005-07-15 14:35:20.766 R[7474] Preferences.setKey:"Stdout Color" withObject:"<040b7479 70656473 74726561 6d8103e8 84014084 8484074e 53436f6c 6f720084 84084e53 4f626a65 63740085 84016301 84046666 6666833e 3ea76b83 3f60b957 833e7ec9 fa0186>" 2005-07-15 14:35:20.772 R[7474] RController.updatePreferences 2005-07-15 14:35:20.803 R[7474] - done, preferences updated 2005-07-15 14:35:29.157 R[7474] RController.setStatusLine: "" 2005-07-15 14:35:29.326 R[7474] RController.setStatusLine: "" 2005-07-15 14:35:30.276 R[7474] RController.setStatusLine: "" 2005-07-15 14:35:38.135 R[7474] REngine.beginProtected, maskEvents=0, protectedMode=0 2005-07-15 14:35:38.135 R[7474] REngine.evaluateString:"try(gsub('\\s+',' ',paste(capture.output(print(args(ls))),collapse='')),silent=TRUE)" 2005-07-15 14:35:38.145 R[7474] RController.setStatusLine: "executing: try(gsub('\\s+',' ',paste(capture.output(print(args(ls))),collapse='')),silent=TRUE)" 2005-07-15 14:35:38.166 R[7474] RController.setStatusLine: "" 2005-07-15 14:35:38.166 R[7474] - result: RSEXP@1aa2608, string[1] 2005-07-15 14:35:38.167 R[7474] RController.setStatusLine: "ls(name, pos = -1, envir = as.environment(pos), all.names = FALSE, pattern)" 2005-07-15 14:35:38.167 R[7474] REngine.endProtected, maskEvents=1, protectedMode=1 2005-07-15 14:35:38.539 R[7474] RController.setStatusLine: "" 2005-07-15 14:35:43.122 R[7474] REngine.beginProtected, maskEvents=0, protectedMode=0 2005-07-15 14:35:43.122 R[7474] REngine.evaluateString:"try(gsub('\\s+',' ',paste(capture.output(print(args(q))),collapse='')),silent=TRUE)" 2005-07-15 14:35:43.132 R[7474] RController.setStatusLine: "executing: try(gsub('\\s+',' ',paste(capture.output(print(args(q))),collapse='')),silent=TRUE)" 2005-07-15 14:35:43.156 R[7474] RController.setStatusLine: "" 2005-07-15 14:35:43.157 R[7474] - result: RSEXP@1a6a5c8, string[1] 2005-07-15 14:35:43.158 R[7474] RController.setStatusLine: "q(save = "default", status = 0, runLast = TRUE)" 2005-07-15 14:35:43.159 R[7474] REngine.endProtected, maskEvents=1, protectedMode=1 2005-07-15 14:35:46.414 R[7474] RController.setStatusLine: "" 2005-07-15 14:35:48.051 R[7474] RController.setStatusLine: "" R has exited with status 0. [Session started at 2005-07-15 14:35:59 -0500.] 2005-07-15 14:35:59.743 R[7478] [GlobalExHandler.init - ready to track exceptions] 2005-07-15 14:36:00.523 R[7478] CFLog (0): CFMessagePort: bootstrap_register(): failed 1103 (0x44f), port = 0x3803, name = 'org.R-project.R.ServiceProvider' See /usr/include/servers/bootstrap_defs.h for the error codes. 2005-07-15 14:36:00.596 R[7478] CFLog (99): CFMessagePortCreateLocal(): failed to name Mach port (org.R-project.R.ServiceProvider) 2005-07-15 14:36:01.078 R[7478] RController.awakeFromNib 2005-07-15 14:36:01.099 R[7478] - load preferences 2005-07-15 14:36:01.110 R[7478] RController.updatePreferences 2005-07-15 14:36:01.117 R[7478] - releasing "Monaco 10.00 pt. P [] (0x04314180) fobj=0x011ce8a0, spc=6.00" 2005-07-15 14:36:01.118 R[7478] - using new "Monaco 10.00 pt. P [] (0x04314180) fobj=0x011ce8a0, spc=6.00" 2005-07-15 14:36:01.122 R[7478] - done, preferences updated 2005-07-15 14:36:01.123 R[7478] - init R_LIBS 2005-07-15 14:36:01.123 R[7478] - set APP VERSION 2005-07-15 14:36:01.124 R[7478] - set R home 2005-07-15 14:36:01.124 R[7478] - set locale 2005-07-15 14:36:01.163 R[7478] - setting LANG=en_US.UTF-8 2005-07-15 14:36:01.175 R[7478] - init R 2005-07-15 14:36:01.189 R[7478] - font and other widgets 2005-07-15 14:36:01.304 R[7478] - setup timer 2005-07-15 14:36:01.317 R[7478] - setup stdout/err grabber 2005-07-15 14:36:01.343 R[7478] - set cwd and load history 2005-07-15 14:36:01.353 R[7478] RController.doLoadHistory 2005-07-15 14:36:01.354 R[7478] - history file to load: .Rhistory 2005-07-15 14:36:01.355 R[7478] - did NOT clear history, append with: .Rhistory 2005-07-15 14:36:01.361 R[7478] - awake is done 2005-07-15 14:36:01.727 R[7478] Trouble registering connection CPNoteBook R Channel. 2005-07-15 14:36:01.880 R[7478] RController.applicationDidFinishLaunching 2005-07-15 14:36:01.897 R[7478] - initalizing R 2005-07-15 14:36:01.911 R[7478] REngine.activate: starting R ... 2005-07-15 14:36:05.335 R[7478] REngine.activate: R started with no error 2005-07-15 14:36:05.346 R[7478] - set R options 2005-07-15 14:36:05.359 R[7478] REngine.executeString:"options(htmlhelp=TRUE)" 2005-07-15 14:36:05.381 R[7478] RController.setStatusLine: "executing: options(htmlhelp=TRUE)" 2005-07-15 14:36:05.414 R[7478] RController.setStatusLine: "Loading R ..." 2005-07-15 14:36:05.425 R[7478] - success: YES 2005-07-15 14:36:05.432 R[7478] - set default CRAN mirror 2005-07-15 14:36:05.432 R[7478] REngine.executeString:"try({ r <- getOption('repos'); r['CRAN']<-gsub('/$', '', "http://www.biometrics.mtu.edu/CRAN"); options(repos = r) },silent=TRUE)" 2005-07-15 14:36:05.473 R[7478] RController.setStatusLine: "executing: try({ r <- getOption('repos'); r['CRAN']<-gsub('/$', '', "http://www.biometrics.mtu.edu/CRAN"); options(repos = r) },silent=TRUE)" 2005-07-15 14:36:05.567 R[7478] RController.setStatusLine: "Loading R ..." 2005-07-15 14:36:05.576 R[7478] - success: YES 2005-07-15 14:36:05.576 R[7478] - clean up and flush console 2005-07-15 14:36:05.618 R[7478] - setup notification and timers 2005-07-15 14:36:05.635 R[7478] - show main window 2005-07-15 14:36:05.657 R[7478] - setup REPL trigger timer 2005-07-15 14:36:05.668 R[7478] - done, ready to go 2005-07-15 14:36:05.814 R[7478] RController.setStatusLine: "" 2005-07-15 14:38:14.360 R[7478] REngine.beginProtected, maskEvents=0, protectedMode=0 2005-07-15 14:38:14.360 R[7478] REngine.evaluateString:"try(gsub('\\s+',' ',paste(capture.output(print(args(q))),collapse='')),silent=TRUE)" 2005-07-15 14:38:14.371 R[7478] RController.setStatusLine: "executing: try(gsub('\\s+',' ',paste(capture.output(print(args(q))),collapse='')),silent=TRUE)" 2005-07-15 14:38:14.439 R[7478] RController.setStatusLine: "" 2005-07-15 14:38:14.450 R[7478] - result: RSEXP@1aa5248, string[1] 2005-07-15 14:38:14.465 R[7478] RController.setStatusLine: "q(save = "default", status = 0, runLast = TRUE)" 2005-07-15 14:38:14.469 R[7478] REngine.endProtected, maskEvents=1, protectedMode=1 2005-07-15 14:38:16.788 R[7478] RController.setStatusLine: "" 2005-07-15 14:38:17.763 R[7478] RController.setStatusLine: ""