[R-SIG-Mac] macOS may not give R much time in a long compute
Prof Brian Ripley
r|p|ey @end|ng |rom @t@t@@ox@@c@uk
Sat Feb 18 13:40:59 CET 2023
Are you using R.app (you failed to say)?
If so, have you acted on the documentation about 'app nap'? E.g. §4.1
of the R-admin manual.
On 18/02/2023 12:31, Spencer Graves wrote:
> Hello:
>
>
> During a long compute (in a while loop), I've asked R to report
> progress via:
>
>
> # Progress report every 3 minutes
> et3i <- proc.time()-startT3i
> if(max(et3i)>180){
> startT3i <- proc.time()
> cat('iscan = ', iscan3, '; et3i = ',
> round(et3i[1:3]), '\n')
> }
>
>
> When it's running properly, I get something like the following:
>
>
> iscan = 22992 ; et3i = 180 26 104
>
>
> However if I leave my computer running unattended, I can get
> reports like the following:
>
>
> iscan = 32124 ; et3i = 22 1 180
>
>
> Evidently, macOS 11.7.4 decided NOT to give time to R.
>
>
> Suggestions?
> Thanks,
> Spencer Graves
>
>
> sessionInfo()
> R version 4.2.2 (2022-10-31)
> Platform: x86_64-apple-darwin17.0 (64-bit)
> Running under: macOS Big Sur 11.7.4
>
> Matrix products: default
> LAPACK:
> /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
> loaded via a namespace (and not attached):
> [1] compiler_4.2.2 tools_4.2.2 knitr_1.42 xfun_0.37
> >
--
Brian D. Ripley, ripley using stats.ox.ac.uk
Emeritus Professor of Applied Statistics, University of Oxford
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