[R-SIG-Mac] [External] Re: another freeze on plot(1:10)
Richard M. Heiberger
rmh @end|ng |rom temp|e@edu
Fri Aug 12 04:22:06 CEST 2022
Dear John,
Yes, that is an important question.
It occurs both from the R app and from the terminal as well as from emacs.
The issue is very specifically the default graphics device, either by specification quartz() or by just drawing something.
Two months ago, it was because the Mac fonts got damaged. I reset them and all was well.
This time the crash report doesn’t show the fonts problem, but the font checking app is again not working correctly.
The progress bar stops at 1% and never moves. This time I attempted to repair the fonts. The repair tool
said the fonts are ok and that it didn’t do anything.
Rich
From: John Fox <jfox using mcmaster.ca>
Date: Thursday, August 11, 2022 at 22:10
To: Richard M. Heiberger <rmh using temple.edu>
Cc: R list <r-sig-mac using r-project.org>
Subject: [External] Re: [R-SIG-Mac] another freeze on plot(1:10)
Hi Rich,
I imagine that there are other people who will make more sense out of
the crash report than I, but one thing that I noticed immediately was
that you're using R from Emacs.
I've been using R 4.2.x arm64 builds extensively on two up-to-date Macs,
a MacBook Pro and a Mac Studio desktop, both with M1 chips. I use both
RStudio and the R.app GUI. I haven't observed anything like the problem
you're experiencing.
Does the problem occur when you're not using Emacs?
I hope this is of some help,
John
On 2022-08-11 8:10 p.m., Richard M. Heiberger wrote:
> Still locked up. I don�t always remember X11().
>
> Here is the latest crash log.
> Can anyone suggest what to do next.
>
>
> Date/Time: 2022-08-11 20:05:19.474 -0400
> End time: 2022-08-11 20:06:56.295 -0400
> OS Version: macOS 12.3 (Build 21E230)
> Architecture: arm64e
> Report Version: 35
> Incident Identifier: B92A6E63-C806-485E-B95B-4B03BB547BFF
>
> Data Source: Stackshots
> Shared Cache: 00EDBAF8-9281-3F26-B94F-E6A315E3A659 slid base address 0x1b4160000, slide 0x34160000
> Shared Cache: 71741BEE-0ABC-3E06-B329-770CAC959B0C slid base address 0x7ff812304000, slide 0x12304000
> Shared Cache: CB70EAD7-3266-30B7-BECD-BD97E7998A2A slid base address 0x1ea318000, slide 0x6a318000
>
> Command: R
> Path: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/bin/exec/R
> Codesigning ID: R
> Team ID: VZLD955F6P
> Architecture: arm64
> Parent: Emacs [47671]
> Responsible: Emacs [47671]
> PID: 8424
> Time Since Fork: 354s
>
> Event: hang
> Duration: 96.82s
> Duration Sampled: 1.20s (process was unresponsive for 96 seconds before sampling)
> Steps: 12 (100ms sampling interval)
>
> Hardware model: MacBookAir10,1
> Active cpus: 8
> HW page size: 16384
> VM page size: 16384
>
> Time Awake Since Boot: 1385070s
> Time Since Wake: 3929s
>
> Total CPU Time: 2.774s (5.6G cycles, 7.8G instructions, 0.71c/i)
> Advisory levels: Battery -> 3, User -> 2, ThermalPressure -> 0, Combined -> 2
> Free disk space: 1298.75 GB/1858.19 GB, low space threshold 3072 MB
>
> --------------------------------------------------
> Timeline format: stacks are sorted chronologically
> Use -i and -heavy to re-report with count sorting
> --------------------------------------------------
>
>
> Heaviest stack for the main thread of the target process:
> 12 start + 516 (dyld + 20616) [0x104d09088]
> 12 main + 32 (R + 16032) [0x10494bea0]
> 12 Rf_mainloop + 16 (main.c:1146,5 in libR.dylib + 1081808) [0x1052901d0]
> 12 run_Rmainloop + 100 (main.c:1139,5 in libR.dylib + 1081380) [0x105290024]
> 12 R_ReplConsole + 172 (main.c:316,11 in libR.dylib + 1081580) [0x1052900ec]
> 12 Rf_ReplIteration + 764 (main.c:264,2 in libR.dylib + 1076156) [0x10528ebbc]
> 12 Rf_eval + 1308 (eval.c:871,12 in libR.dylib + 738972) [0x10523c69c]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 1096 (eval.c:823,12 in libR.dylib + 738760) [0x10523c5c8]
> 12 do_begin + 420 (eval.c:2539,10 in libR.dylib + 868708) [0x10525c164]
> 12 Rf_eval + 1308 (eval.c:871,12 in libR.dylib + 738972) [0x10523c69c]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 1096 (eval.c:823,12 in libR.dylib + 738760) [0x10523c5c8]
> 12 do_begin + 420 (eval.c:2539,10 in libR.dylib + 868708) [0x10525c164]
> 12 Rf_eval + 1096 (eval.c:823,12 in libR.dylib + 738760) [0x10523c5c8]
> 12 do_set + 360 (eval.c:2991,8 in libR.dylib + 870120) [0x10525c6e8]
> 12 Rf_eval + 1308 (eval.c:871,12 in libR.dylib + 738972) [0x10523c69c]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 30128 (eval.c:7156,15 in libR.dylib + 769968) [0x105243fb0]
> 12 do_usemethod + 744 (objects.c:565,9 in libR.dylib + 1169000) [0x1052a5668]
> 12 Rf_usemethod + 768 (objects.c in libR.dylib + 1167296) [0x1052a4fc0]
> 12 dispatchMethod + 768 (objects.c:436,16 in libR.dylib + 1168128) [0x1052a5300]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 22680 (eval.c:7052,16 in libR.dylib + 762520) [0x105242298]
> 12 Rf_eval + 432 (eval.c:784,6 in libR.dylib + 738096) [0x10523c330]
> 12 forcePromise + 164 (eval.c:568,8 in libR.dylib + 850212) [0x105257924]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 30128 (eval.c:7156,15 in libR.dylib + 769968) [0x105243fb0]
> 12 do_usemethod + 744 (objects.c:565,9 in libR.dylib + 1169000) [0x1052a5668]
> 12 Rf_usemethod + 768 (objects.c in libR.dylib + 1167296) [0x1052a4fc0]
> 12 dispatchMethod + 768 (objects.c:436,16 in libR.dylib + 1168128) [0x1052a5300]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 11048 (eval.c:6744,4 in libR.dylib + 750888) [0x10523f528]
> 12 bc_check_sigint + 4 (eval.c:5546,5 in libR.dylib + 750888) [0x10523f528]
> 12 R_CheckUserInterrupt + 92 (errors.c:153,5 in libR.dylib + 699612) [0x105232cdc]
> 12 R_ProcessEvents + 48 (sys-unix.c:958,50 in libR.dylib + 2014640) [0x105373db0]
> 12 cocoa_process_events + 132 (grDevices.so + 197060) [0x104ca41c4]
> 12 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1328 (AppKit + 263364) [0x1b70b24c4]
> 12 _DPSNextEvent + 860 (AppKit + 269260) [0x1b70b3bcc]
> 12 _BlockUntilNextEventMatchingListInModeWithFilter + 72 (HIToolbox + 211208) [0x1bd174908]
> 12 ReceiveNextEventCommon + 324 (HIToolbox + 211556) [0x1bd174a64]
> 12 RunCurrentEventLoopInMode + 292 (HIToolbox + 212440) [0x1bd174dd8]
> 12 CFRunLoopRunSpecific + 600 (CoreFoundation + 533648) [0x1b4554490]
> 12 __CFRunLoopRun + 772 (CoreFoundation + 536372) [0x1b4554f34]
> 12 __CFRunLoopDoObservers + 592 (CoreFoundation + 539136) [0x1b4555a00]
> 12 __CFRUNLOOP_IS_CALLING_OUT_TO_AN_OBSERVER_CALLBACK_FUNCTION__ + 36 (CoreFoundation + 539568) [0x1b4555bb0]
> 12 ___NSRunLoopObserverCreateWithHandler_block_invoke + 64 (AppKit + 9506400) [0x1b7982e60]
> 12 __62+[CATransaction(NSCATransaction) NS_setFlushesWithDisplayLink]_block_invoke + 304 (AppKit + 1756464) [0x1b721ed30]
> 12 CA::Transaction::commit() + 704 (QuartzCore + 11548) [0x1bb3b6d1c]
> 12 CA::Context::commit_transaction(CA::Transaction*, double, double*) + 464 (QuartzCore + 1493564) [0x1bb520a3c]
> 12 CA::Layer::display_if_needed(CA::Transaction*) + 756 (QuartzCore + 135988) [0x1bb3d5334]
> 12 -[_NSViewBackingLayer display] + 644 (AppKit + 1131108) [0x1b7186264]
> 12 -[_NSBackingLayer display] + 372 (AppKit + 1683552) [0x1b720d060]
> 12 -[CALayer _display] + 1856 (QuartzCore + 139908) [0x1bb3d6284]
> 12 invocation function for block in CA::Layer::display_() + 64 (QuartzCore + 529800) [0x1bb435588]
> 12 CABackingStoreUpdate_ + 484 (QuartzCore + 144088) [0x1bb3d72d8]
> 12 -[NSView(NSLayerKitGlue) drawLayer:inContext:] + 344 (AppKit + 1684136) [0x1b720d2a8]
> 12 -[NSView(NSLayerKitGlue) _drawViewBackingLayer:inContext:drawingHandler:] + 688 (AppKit + 1685012) [0x1b720d614]
> 12 -[NSView _recursive:displayRectIgnoringOpacity:inContext:stopAtLayerBackedViews:] + 1308 (AppKit + 9258016) [0x1b7946420]
> 12 _NSViewDrawRect + 148 (AppKit + 1687200) [0x1b720dea0]
> 12 -[QuartzCocoaView drawRect:] + 484 (grDevices.so + 190372) [0x104ca27a4]
> 12 QuartzDevice_ReplayDisplayList + 64 (grDevices.so + 167168) [0x104c9cd00]
> 12 GEplayDisplayList + 316 (engine.c:3017,7 in libR.dylib + 623484) [0x10522037c]
> 12 do_dotcallgr + 76 (dotcode.c:1389,5 in libR.dylib + 551116) [0x10520e8cc]
> 12 do_dotcall + 316 (dotcode.c:1284,11 in libR.dylib + 549884) [0x10520e3fc]
> 12 R_doDotCall + 268 (dotcode.c:604,17 in libR.dylib + 546060) [0x10520d50c]
> 12 L_setviewport + 144 (grid.so + 31888) [0x10500fc90]
> 12 doSetViewport + 332 (grid.so + 29644) [0x10500f3cc]
> 12 calcViewportTransform + 1556 (grid.so + 121940) [0x105025c54]
> 12 calcViewportLayout + 236 (grid.so + 85484) [0x10501cdec]
> 12 findRelWidths + 92 (grid.so + 80412) [0x10501ba1c]
> 12 pureNullUnit + 892 (grid.so + 97148) [0x10501fb7c]
> 12 Rf_eval + 1308 (eval.c:871,12 in libR.dylib + 738972) [0x10523c69c]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 30128 (eval.c:7156,15 in libR.dylib + 769968) [0x105243fb0]
> 12 do_usemethod + 744 (objects.c:565,9 in libR.dylib + 1169000) [0x1052a5668]
> 12 Rf_usemethod + 768 (objects.c in libR.dylib + 1167296) [0x1052a4fc0]
> 12 dispatchMethod + 768 (objects.c:436,16 in libR.dylib + 1168128) [0x1052a5300]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0]
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c]
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4]
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8]
> 12 bcEval + 28396 (eval.c:7093,12 in libR.dylib + 768236) [0x1052438ec]
> 12 do_dotcall + 316 (dotcode.c:1284,11 in libR.dylib + 549884) [0x10520e3fc]
> 12 R_doDotCall + 1664 (dotcode.c:622,17 in libR.dylib + 547456) [0x10520da80]
> 12 gridText + 1176 (grid.so + 63448) [0x1050177d8]
> 12 textRect + 368 (grid.so + 116784) [0x105024830]
> 12 GEStrHeight + 260 (engine.c:2670,2 in libR.dylib + 611076) [0x10521d304]
> 12 GEMetricInfo + 268 (engine.c:2563,2 in libR.dylib + 610572) [0x10521d10c]
> 12 RQuartz_MetricInfo + 116 (grDevices.so + 173620) [0x104c9e634]
> 12 RQuartz_Font + 800 (grDevices.so + 176224) [0x104c9f060]
> 12 ATSFontFindFromName + 48 (ATS + 245484) [0x1c1dcceec]
> 12 FOLazyInitialize + 432 (ATS + 8288) [0x1c1d93060]
> 12 NewHookUpWithATSServer(unsigned char) + 468 (ATS + 10000) [0x1c1d93710]
> 12 RendezvousWithServer(char*) + 316 (ATS + 10552) [0x1c1d93938]
> 12 SendFontManagementMessageWithMessageStatus + 208 (ATS + 10892) [0x1c1d93a8c]
> 12 mach_msg_trap + 8 (libsystem_kernel.dylib + 6352) [0x1b444c8d0]
> *12 ??? (kernel.release.t8101 + 30712) [0xfffffe00078937f8]
> *12 ??? (kernel.release.t8101 + 1628744) [0xfffffe0007a19a48]
> *12 ??? (kernel.release.t8101 + 1584016) [0xfffffe0007a0eb90]
> *12 ??? (kernel.release.t8101 + 312716) [0xfffffe00078d858c]
> *12 ??? (kernel.release.t8101 + 200820) [0xfffffe00078bd074]
> *12 ??? (kernel.release.t8101 + 223200) [0xfffffe00078c27e0]
> *12 ??? (kernel.release.t8101 + 557240) [0xfffffe00079140b8]
> *12 ??? (kernel.release.t8101 + 564156) [0xfffffe0007915bbc]
>
>
> Process: R [8424] [unique pid 705395]
> UUID: C5EC35DD-BC8F-3AEA-A5AF-5D6585E7AC5D
> Path: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/bin/exec/R
> Codesigning ID: R
> Team ID: VZLD955F6P
> Shared Cache: 00EDBAF8-9281-3F26-B94F-E6A315E3A659 slid base address 0x1b4160000, slide 0x34160000
> Architecture: arm64
> Parent: Emacs [47671]
> Responsible: Emacs [47671]
> UID: 501
> Footprint: 287.08 MB
> Time Since Fork: 354s
> Num samples: 12 (1-12)
> CPU Time: <0.001s (382.3K cycles, 126.6K instructions, 3.02c/i)
> Note: Unresponsive for 96 seconds before sampling
> Note: 2 idle work queue threads omitted
>
> Thread 0xabb843 DispatchQueue "com.apple.main-thread"(1) 12 samples (1-12) priority 46 (base 46)
> <thread QoS user interactive (requested user interactive), process unclamped, IO tier 0>
> 12 start + 516 (dyld + 20616) [0x104d09088] 1-12
> 12 main + 32 (R + 16032) [0x10494bea0] 1-12
> 12 Rf_mainloop + 16 (main.c:1146,5 in libR.dylib + 1081808) [0x1052901d0] 1-12
> 12 run_Rmainloop + 100 (main.c:1139,5 in libR.dylib + 1081380) [0x105290024] 1-12
> 12 R_ReplConsole + 172 (main.c:316,11 in libR.dylib + 1081580) [0x1052900ec] 1-12
> 12 Rf_ReplIteration + 764 (main.c:264,2 in libR.dylib + 1076156) [0x10528ebbc] 1-12
> 12 Rf_eval + 1308 (eval.c:871,12 in libR.dylib + 738972) [0x10523c69c] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 1096 (eval.c:823,12 in libR.dylib + 738760) [0x10523c5c8] 1-12
> 12 do_begin + 420 (eval.c:2539,10 in libR.dylib + 868708) [0x10525c164] 1-12
> 12 Rf_eval + 1308 (eval.c:871,12 in libR.dylib + 738972) [0x10523c69c] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 1096 (eval.c:823,12 in libR.dylib + 738760) [0x10523c5c8] 1-12
> 12 do_begin + 420 (eval.c:2539,10 in libR.dylib + 868708) [0x10525c164] 1-12
> 12 Rf_eval + 1096 (eval.c:823,12 in libR.dylib + 738760) [0x10523c5c8] 1-12
> 12 do_set + 360 (eval.c:2991,8 in libR.dylib + 870120) [0x10525c6e8] 1-12
> 12 Rf_eval + 1308 (eval.c:871,12 in libR.dylib + 738972) [0x10523c69c] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 30128 (eval.c:7156,15 in libR.dylib + 769968) [0x105243fb0] 1-12
> 12 do_usemethod + 744 (objects.c:565,9 in libR.dylib + 1169000) [0x1052a5668] 1-12
> 12 Rf_usemethod + 768 (objects.c in libR.dylib + 1167296) [0x1052a4fc0] 1-12
> 12 dispatchMethod + 768 (objects.c:436,16 in libR.dylib + 1168128) [0x1052a5300] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 22680 (eval.c:7052,16 in libR.dylib + 762520) [0x105242298] 1-12
> 12 Rf_eval + 432 (eval.c:784,6 in libR.dylib + 738096) [0x10523c330] 1-12
> 12 forcePromise + 164 (eval.c:568,8 in libR.dylib + 850212) [0x105257924] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 30128 (eval.c:7156,15 in libR.dylib + 769968) [0x105243fb0] 1-12
> 12 do_usemethod + 744 (objects.c:565,9 in libR.dylib + 1169000) [0x1052a5668] 1-12
> 12 Rf_usemethod + 768 (objects.c in libR.dylib + 1167296) [0x1052a4fc0] 1-12
> 12 dispatchMethod + 768 (objects.c:436,16 in libR.dylib + 1168128) [0x1052a5300] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 11048 (eval.c:6744,4 in libR.dylib + 750888) [0x10523f528] 1-12
> 12 bc_check_sigint + 4 (eval.c:5546,5 in libR.dylib + 750888) [0x10523f528] 1-12
> 12 R_CheckUserInterrupt + 92 (errors.c:153,5 in libR.dylib + 699612) [0x105232cdc] 1-12
> 12 R_ProcessEvents + 48 (sys-unix.c:958,50 in libR.dylib + 2014640) [0x105373db0] 1-12
> 12 cocoa_process_events + 132 (grDevices.so + 197060) [0x104ca41c4] 1-12
> 12 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1328 (AppKit + 263364) [0x1b70b24c4] 1-12
> 12 _DPSNextEvent + 860 (AppKit + 269260) [0x1b70b3bcc] 1-12
> 12 _BlockUntilNextEventMatchingListInModeWithFilter + 72 (HIToolbox + 211208) [0x1bd174908] 1-12
> 12 ReceiveNextEventCommon + 324 (HIToolbox + 211556) [0x1bd174a64] 1-12
> 12 RunCurrentEventLoopInMode + 292 (HIToolbox + 212440) [0x1bd174dd8] 1-12
> 12 CFRunLoopRunSpecific + 600 (CoreFoundation + 533648) [0x1b4554490] 1-12
> 12 __CFRunLoopRun + 772 (CoreFoundation + 536372) [0x1b4554f34] 1-12
> 12 __CFRunLoopDoObservers + 592 (CoreFoundation + 539136) [0x1b4555a00] 1-12
> 12 __CFRUNLOOP_IS_CALLING_OUT_TO_AN_OBSERVER_CALLBACK_FUNCTION__ + 36 (CoreFoundation + 539568) [0x1b4555bb0] 1-12
> 12 ___NSRunLoopObserverCreateWithHandler_block_invoke + 64 (AppKit + 9506400) [0x1b7982e60] 1-12
> 12 __62+[CATransaction(NSCATransaction) NS_setFlushesWithDisplayLink]_block_invoke + 304 (AppKit + 1756464) [0x1b721ed30] 1-12
> 12 CA::Transaction::commit() + 704 (QuartzCore + 11548) [0x1bb3b6d1c] 1-12
> 12 CA::Context::commit_transaction(CA::Transaction*, double, double*) + 464 (QuartzCore + 1493564) [0x1bb520a3c] 1-12
> 12 CA::Layer::display_if_needed(CA::Transaction*) + 756 (QuartzCore + 135988) [0x1bb3d5334] 1-12
> 12 -[_NSViewBackingLayer display] + 644 (AppKit + 1131108) [0x1b7186264] 1-12
> 12 -[_NSBackingLayer display] + 372 (AppKit + 1683552) [0x1b720d060] 1-12
> 12 -[CALayer _display] + 1856 (QuartzCore + 139908) [0x1bb3d6284] 1-12
> 12 invocation function for block in CA::Layer::display_() + 64 (QuartzCore + 529800) [0x1bb435588] 1-12
> 12 CABackingStoreUpdate_ + 484 (QuartzCore + 144088) [0x1bb3d72d8] 1-12
> 12 -[NSView(NSLayerKitGlue) drawLayer:inContext:] + 344 (AppKit + 1684136) [0x1b720d2a8] 1-12
> 12 -[NSView(NSLayerKitGlue) _drawViewBackingLayer:inContext:drawingHandler:] + 688 (AppKit + 1685012) [0x1b720d614] 1-12
> 12 -[NSView _recursive:displayRectIgnoringOpacity:inContext:stopAtLayerBackedViews:] + 1308 (AppKit + 9258016) [0x1b7946420] 1-12
> 12 _NSViewDrawRect + 148 (AppKit + 1687200) [0x1b720dea0] 1-12
> 12 -[QuartzCocoaView drawRect:] + 484 (grDevices.so + 190372) [0x104ca27a4] 1-12
> 12 QuartzDevice_ReplayDisplayList + 64 (grDevices.so + 167168) [0x104c9cd00] 1-12
> 12 GEplayDisplayList + 316 (engine.c:3017,7 in libR.dylib + 623484) [0x10522037c] 1-12
> 12 do_dotcallgr + 76 (dotcode.c:1389,5 in libR.dylib + 551116) [0x10520e8cc] 1-12
> 12 do_dotcall + 316 (dotcode.c:1284,11 in libR.dylib + 549884) [0x10520e3fc] 1-12
> 12 R_doDotCall + 268 (dotcode.c:604,17 in libR.dylib + 546060) [0x10520d50c] 1-12
> 12 L_setviewport + 144 (grid.so + 31888) [0x10500fc90] 1-12
> 12 doSetViewport + 332 (grid.so + 29644) [0x10500f3cc] 1-12
> 12 calcViewportTransform + 1556 (grid.so + 121940) [0x105025c54] 1-12
> 12 calcViewportLayout + 236 (grid.so + 85484) [0x10501cdec] 1-12
> 12 findRelWidths + 92 (grid.so + 80412) [0x10501ba1c] 1-12
> 12 pureNullUnit + 892 (grid.so + 97148) [0x10501fb7c] 1-12
> 12 Rf_eval + 1308 (eval.c:871,12 in libR.dylib + 738972) [0x10523c69c] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 30128 (eval.c:7156,15 in libR.dylib + 769968) [0x105243fb0] 1-12
> 12 do_usemethod + 744 (objects.c:565,9 in libR.dylib + 1169000) [0x1052a5668] 1-12
> 12 Rf_usemethod + 768 (objects.c in libR.dylib + 1167296) [0x1052a4fc0] 1-12
> 12 dispatchMethod + 768 (objects.c:436,16 in libR.dylib + 1168128) [0x1052a5300] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 27568 (eval.c:7104,12 in libR.dylib + 767408) [0x1052435b0] 1-12
> 12 Rf_applyClosure + 524 (eval.c:1844,16 in libR.dylib + 852492) [0x10525820c] 1-12
> 12 R_execClosure + 3156 (eval.c in libR.dylib + 858580) [0x1052599d4] 1-12
> 12 Rf_eval + 584 (eval.c:748,8 in libR.dylib + 738248) [0x10523c3c8] 1-12
> 12 bcEval + 28396 (eval.c:7093,12 in libR.dylib + 768236) [0x1052438ec] 1-12
> 12 do_dotcall + 316 (dotcode.c:1284,11 in libR.dylib + 549884) [0x10520e3fc] 1-12
> 12 R_doDotCall + 1664 (dotcode.c:622,17 in libR.dylib + 547456) [0x10520da80] 1-12
> 12 gridText + 1176 (grid.so + 63448) [0x1050177d8] 1-12
> 12 textRect + 368 (grid.so + 116784) [0x105024830] 1-12
> 12 GEStrHeight + 260 (engine.c:2670,2 in libR.dylib + 611076) [0x10521d304] 1-12
> 12 GEMetricInfo + 268 (engine.c:2563,2 in libR.dylib + 610572) [0x10521d10c] 1-12
> 12 RQuartz_MetricInfo + 116 (grDevices.so + 173620) [0x104c9e634] 1-12
> 12 RQuartz_Font + 800 (grDevices.so + 176224) [0x104c9f060] 1-12
> 12 ATSFontFindFromName + 48 (ATS + 245484) [0x1c1dcceec] 1-12
> 12 FOLazyInitialize + 432 (ATS + 8288) [0x1c1d93060] 1-12
> 12 NewHookUpWithATSServer(unsigned char) + 468 (ATS + 10000) [0x1c1d93710] 1-12
> 12 RendezvousWithServer(char*) + 316 (ATS + 10552) [0x1c1d93938] 1-12
> 12 SendFontManagementMessageWithMessageStatus + 208 (ATS + 10892) [0x1c1d93a8c] 1-12
> 12 mach_msg_trap + 8 (libsystem_kernel.dylib + 6352) [0x1b444c8d0] 1-12
> *12 ??? (kernel.release.t8101 + 30712) [0xfffffe00078937f8] 1-12
> *12 ??? (kernel.release.t8101 + 1628744) [0xfffffe0007a19a48] 1-12
> *12 ??? (kernel.release.t8101 + 1584016) [0xfffffe0007a0eb90] 1-12
> *12 ??? (kernel.release.t8101 + 312716) [0xfffffe00078d858c] 1-12
> *12 ??? (kernel.release.t8101 + 200820) [0xfffffe00078bd074] 1-12
> *12 ??? (kernel.release.t8101 + 223200) [0xfffffe00078c27e0] 1-12
> *12 ??? (kernel.release.t8101 + 557240) [0xfffffe00079140b8] 1-12
> *12 ??? (kernel.release.t8101 + 564156) [0xfffffe0007915bbc] (blocked by turnstile with priority 47 waiting for atsd [2369] [unique pid 599749] thread 0x8d0f6a) 1-12
>
> Thread 0xabb958 12 samples (1-12) priority 31 (base 31) cpu time <0.001s (166.7K cycles, 42.7K instructions, 3.90c/i)
> <thread QoS default (requested default), process unclamped, IO tier 0>
> 12 thread_start + 8 (libsystem_pthread.dylib + 8332) [0x1b448508c] 1-12
> 12 _pthread_start + 148 (libsystem_pthread.dylib + 29292) [0x1b448a26c] 1-12
> 12 clic_thread_func + 112 (thread.c:37,5 in cli.so + 45360) [0x10748f130] 1-12
> 12 __semwait_signal + 8 (libsystem_kernel.dylib + 20620) [0x1b445008c] 1-12
> *12 ??? (kernel.release.t8101 + 612700) [0xfffffe000792195c] 1-12
>
> Thread 0xabc151 12 samples (1-12) priority 31 (base 31) cpu time <0.001s (215.5K cycles, 83.9K instructions, 2.57c/i)
> <thread QoS default (requested default), process unclamped, IO tier 0>
> 12 thread_start + 8 (libsystem_pthread.dylib + 8332) [0x1b448508c] 1-12
> 12 _pthread_start + 148 (libsystem_pthread.dylib + 29292) [0x1b448a26c] 1-12
> 12 __NSThread__start__ + 808 (Foundation + 378652) [0x1b542971c] 1-12
> 12 __select + 8 (libsystem_kernel.dylib + 50616) [0x1b44575b8] 1-12
> *12 ??? (kernel.release.t8101 + 5993452) [0xfffffe0007e433ec] 1-12
>
> Binary Images:
> 0x104948000 - 0x104953fff R (0) <C5EC35DD-BC8F-3AEA-A5AF-5D6585E7AC5D> /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/bin/exec/R
> 0x104c74000 - 0x104cbbfff grDevices.so (0) <3AE53239-B133-3B06-8CD0-CD1BCD1B0A7B> /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/grDevices/libs/grDevices.so
> 0x104d04000 - 0x104d7ffff dyld (955) <FBB89662-E6F2-3434-B542-F75185AC5E74> /usr/lib/dyld
> 0x105008000 - 0x10502ffff grid.so (0) <588A9F0C-D14D-3ED1-B81A-6AC0818C6130> /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/grid/libs/grid.so
> 0x105188000 - 0x1055c7fff libR.dylib <02BAE8C9-EC83-324F-B773-939E6AC2E7BB> /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libR.dylib
> 0x107484000 - 0x1074abfff cli.so <3CE14322-6F50-3BB0-838D-CD6874EB3BFC> /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/cli/libs/cli.so
> 0x1b444b000 - 0x1b4482fff libsystem_kernel.dylib (8020.101.4) <1D7B3B8E-75A1-34EA-AA52-9F7C23155C55> /usr/lib/system/libsystem_kernel.dylib
> 0x1b4483000 - 0x1b448ffff libsystem_pthread.dylib (486.100.11) <CEE8BC77-6923-34D9-89A3-6F8F7279605E> /usr/lib/system/libsystem_pthread.dylib
> 0x1b44d2000 - 0x1b4a17fff com.apple.CoreFoundation 6.9 (1858.112) <8E1809FF-F5B1-3D9E-BE15-F2E7B1D8CE51> /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
> 0x1b53cd000 - 0x1b57bdfff com.apple.Foundation 6.9 (1858.112) <589677DD-19B7-3F93-B2B6-EED7117729CA> /System/Library/Frameworks/Foundation.framework/Versions/C/Foundation
> 0x1b7072000 - 0x1b7f29fff com.apple.AppKit 6.9 (2113.40.126) <465B9570-6646-31EA-A082-AB0DFA538966> /System/Library/Frameworks/AppKit.framework/Versions/C/AppKit
> 0x1bb3b4000 - 0x1bb6ddfff com.apple.QuartzCore 1.11 (964.19.5) <B3F9D8BC-5D97-3A56-8797-FD3E8847A5B0> /System/Library/Frameworks/QuartzCore.framework/Versions/A/QuartzCore
> 0x1bd141000 - 0x1bd474fff com.apple.HIToolbox 2.1.1 (1113.9) <4A1D1F30-C79D-3502-B51F-9792ADBD8E06> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox
> 0x1c1d91000 - 0x1c1e00fff com.apple.ApplicationServices.ATS 377 (533.3.0.1) <6B09B034-30FA-3EC8-B82B-22A280E7EC5B> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/ATS
> *0xfffffe000788c000 - 0xfffffe0008117fff kernel.release.t8101 (8020.101.4) <F027EB2E-26A7-3A4E-87FA-6A745379530C>__TEXT_EXEC /System/Library/Kernels/kernel.release.t8101
>
> From: Richard M. Heiberger <rmh using temple.edu>
> Date: Monday, August 08, 2022 at 22:26
> To: R list <r-sig-mac using r-project.org>
> Subject: another freeze on plot(1:10)
> The symptom is the same as two months ago.
> Attempting to plot anything to the default device
>
> Either with
> plot(1:10)
>
> or
> quartz()
> plot(1:10)
>
> freezes R, the beach ball spins on the quartz device, and force quit is necessary.
>
> Following the previous diagnosis, I attempted to validate the fonts in the �Font Book.app�.
> Again, the progress bar doesn�t progress, so I quit the app.
> This time, restore standard fonts doesn�t do anything. It says all is ok, but it also says it didn�t make any changes.
>
> R itself, and graphics to the pdf device, work normally.
>
> The X11() works. Therefore I do have an interactive graphics window, but no paging back the way the quartz() device permits.
>
> Rich
>
> [[alternative HTML version deleted]]
>
>
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Hamilton, Ontario, Canada
web: https://nam10.safelinks.protection.outlook.com/?url=https%3A%2F%2Fsocialsciences.mcmaster.ca%2Fjfox%2F&data=05%7C01%7Crmh%40temple.edu%7Ccd9996b47598454a25af08da7c07dcbc%7C716e81efb52244738e3110bd02ccf6e5%7C0%7C0%7C637958670489868438%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=2j85iMhwBCTegBloWldnTUv67cxiCzY0NBI9Yd21Bcw%3D&reserved=0
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