[R-SIG-Mac] more rgl problems

Peter West pbw @end|ng |rom pbw@|d@@u
Thu Feb 18 04:54:45 CET 2021


Ken,

I only used RStudio because it is easier to remove packages. I should have made that clear.

The same thing happens with R.app; that is, library(rgl) hangs indefinitely.

Peter
—
pbw using ehealth.id.au
“For what does it profit a man if he gains the whole world and loses or forfeits himself?”

> On 18 Feb 2021, at 1:41 pm, Ken Beath <ken using kjbeath.com.au> wrote:
> 
> RStudio have a page for reporting bugs at https://github.com/rstudio/rstudio/issues/ <https://github.com/rstudio/rstudio/issues/> You may be the first M! bug.
> 
> They haven’t progressed my fairly serious bug report about Windows (if you plot a graph and the screen hasn’t updated when you start parallel processing then R crashes) from 6 weeks ago, so I wouldn’t be anticipating much progress soon.
> 
> Ken
> 
>> On 18 Feb 2021, at 2:13 pm, Peter West <pbw using pbw.id.au <mailto:pbw using pbw.id.au>> wrote:
>> 
>> And speaking of M1 Silicon:
>> 
>> My XQuartz version is 2.7.11.
>> 
>> Started R 4.0.4.
>> Stopped R 4.0.4
>> Started RStudio
>> 
>>> install.packages("rgl")
>> trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.0/rgl_0.105.13.tgz <https://cran.rstudio.com/bin/macosx/contrib/4.0/rgl_0.105.13.tgz>'
>> Content type 'application/x-gzip' length 6446159 bytes (6.1 MB)
>> ==================================================
>> downloaded 6.1 MB
>> 
>> 
>> The downloaded binary packages are in
>> 	/var/folders/jf/mkyz74311796dl4mxx_7tcx80000gn/T//RtmpflD1wL/downloaded_packages
>>> library(rgl)
>> 
>> RStudio hangs indefinitely.
>> 
>> My RStudio is at 1.4.1103.
>> 
>> Peter
>> 
>>>> pbw using ehealth.id.au <mailto:pbw using ehealth.id.au>
>> “For what does it profit a man if he gains the whole world and loses or forfeits himself?”
>> 
>>> On 18 Feb 2021, at 10:36 am, Richard M. Heiberger <rmh using temple.edu> wrote:
>>> 
>>> This is repeatable when the lines are all pasted in at once.
>>> The example works if I allow some time delay between lines.
>>> 
>>> This is might be a relative of the one from a few months ago.
>>> But this message is about invalid permissions.
>>> =====
>>> 
>>> R version 4.0.4 RC (2021-02-12 r79998) -- "Lost Library Book"
>>> Copyright (C) 2021 The R Foundation for Statistical Computing
>>> Platform: x86_64-apple-darwin17.0 (64-bit)
>>> 
>>> R is free software and comes with ABSOLUTELY NO WARRANTY.
>>> You are welcome to redistribute it under certain conditions.
>>> Type 'license()' or 'licence()' for distribution details.
>>> 
>>> Natural language support but running in an English locale
>>> 
>>> R is a collaborative project with many contributors.
>>> Type 'contributors()' for more information and
>>> 'citation()' on how to cite R or R packages in publications.
>>> 
>>> Type 'demo()' for some demos, 'help()' for on-line help, or
>>> 'help.start()' for an HTML browser interface to help.
>>> Type 'q()' to quit R.
>>> 
>>>> setwd('/Users/rmh/Rwd/')
>>>> library(rgl)
>>>> x <- matrix(1:3, 1,3)
>>>> plot(1:10, col=7)
>>>> open3d()
>>> error: xp_attach_gl_context returned: 2
>>> 
>>> *** caught segfault ***
>>> address 0x18, cause 'invalid permissions'
>>> 
>>> Traceback:
>>> 1: rgl.open(useNULL)
>>> 2: open3d()
>>> 
>>> Possible actions:
>>> 1: abort (with core dump, if enabled)
>>> 2: normal R exit
>>> 3: exit R without saving workspace
>>> 4: exit R saving workspace
>>> Selection: 
>>> 
>>> 
>>> ====
>>> MacBookAir with the M1 chip using the regular intel version of R from CRAN.
>>> Big Sur 11.2.1.
>>> The plot(1:10), col=7) ## went by default to the quartz() device.
>>> 
>>> 
>>> I repeated this about 5 times in ESS, and then once in Terminal.
>>> 
>>> Let me know if you need more information.
>>> 
>>> 
>>> _______________________________________________
>>> R-SIG-Mac mailing list
>>> R-SIG-Mac using r-project.org
>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>> 
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