[R-SIG-Mac] Bug crash on opening a document
Simon Urbanek
@|mon@urb@nek @end|ng |rom R-project@org
Tue Sep 22 01:10:46 CEST 2020
Chris,
please download the latest version from
https://mac.r-project.org/
in particular you can also just download the updated R GUI from that page (which you can run directly from the image) to see if the issue has been fixed in the meantime since there was one major crash issue fixed since the release.
Thanks,
Simon
> On 22/09/2020, at 2:33 AM, Chris Elliott via R-SIG-Mac <r-sig-mac using r-project.org> wrote:
>
> Hi,
>
> When I open a .R document from finder, I get a crash and the Mac reports “Application not responding” On force quit I get a bug report as below
> I get a similar crash when opening a document from the R menu
>
> I never see any of the document window
>
> Thanks
> Chris
>
> My Mac is a mini, running 10.14.6, and R version 4.0.2. I had no problems on 10.14.6 with R 3.x.x.
>
> Date/Time: 2020-09-21 14:47:26 +0100
> End time: 2020-09-21 14:48:56 +0100
> OS Version: Mac OS X 10.14.6 (Build 18G6020)
> Architecture: x86_64h
> Report Version: 28
> Incident Identifier: D3C29A98-8CB2-4EA4-B61D-09FE67787D5B
>
> Data Source: Microstackshots
> Shared Cache: 0x10846000 379693A3-D334-37DB-864B-2E216A26E83E
>
> Command: R
> Path: /Applications/R.app/Contents/MacOS/R
> Identifier: org.R-project.R
> Version: R for R 4.0.2 GUI 1.72 Catalina build (7847)
> PID: 10966
>
> Event: cpu usage
> Action taken: none
> CPU: 90 seconds cpu time over 139 seconds (65% cpu average), exceeding limit of 50% cpu over 180 seconds
> CPU limit: 90s
> Limit duration: 180s
> CPU used: 90s
> Duration: 90.02s
> Steps: 87
>
> Hardware model: Macmini8,1
> Active cpus: 4
>
>
> Heaviest stack for the target process:
> 86 start + 1 (libdyld.dylib + 91093) [0x7fff6817a3d5]
> 86 main + 792 (R + 8120) [0x10d021fb8]
> 86 -[REngine runREPL] + 177 (R + 74833) [0x10d032451]
> 86 run_REngineRmainloop + 263 (R + 120903) [0x10d03d847]
> 86 R_ReplDLLdo1 + 148 (main.c:371,6 in libR.dylib + 1106276) [0x10d23e164]
> 86 Re_ReadConsole + 184 (R + 64840) [0x10d02fd48]
> 86 -[RController handleReadConsole:] + 158 (R + 27086) [0x10d0269ce]
> 86 -[RController doProcessEvents:] + 190 (R + 50046) [0x10d02c37e]
> 86 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1361 (AppKit + 103531) [0x7fff397ec46b]
> 86 _DPSNextEvent + 1935 (AppKit + 109213) [0x7fff397eda9d]
> 86 AEProcessAppleEvent + 54 (HIToolbox + 84151) [0x7fff3b45f8b7]
> 86 aeProcessAppleEvent + 414 (AE + 35585) [0x7fff3d41db01]
> 86 dispatchEventAndSendReply(AEDesc const*, AEDesc*) + 41 (AE + 35881) [0x7fff3d41dc29]
> 86 aeDispatchAppleEvent(AEDesc const*, AEDesc*, unsigned int, unsigned char*) + 1815 (AE + 37783) [0x7fff3d41e397]
> 86 _NSAppleEventManagerGenericHandler + 102 (Foundation + 374061) [0x7fff3e49d52d]
> 86 -[NSAppleEventManager dispatchRawAppleEvent:withRawReply:handlerRefCon:] + 286 (Foundation + 374448) [0x7fff3e49d6b0]
> 86 -[NSApplication(NSAppleEventHandling) _handleCoreEvent:withReplyEvent:] + 764 (AppKit + 124647) [0x7fff397f16e7]
> 86 -[NSApplication(NSAppleEventHandling) _handleAEOpenDocumentsForURLs:] + 228 (AppKit + 3479869) [0x7fff39b2493d]
> 86 __69-[NSApplication(NSAppleEventHandling) _handleAEOpenDocumentsForURLs:]_block_invoke + 886 (AppKit + 3480894) [0x7fff39b24d3e]
> 86 -[NSApplication(NSAppleEventHandling) _openURLs:withCompletionHandler:] + 998 (AppKit + 5152848) [0x7fff39cbd050]
> 86 withWindowOrderingObserverHeuristic + 472 (AppKit + 5153685) [0x7fff39cbd395]
> 86 __withWindowOrderingObserverHeuristic_block_invoke + 43 (AppKit + 5161267) [0x7fff39cbf133]
> 86 __69-[NSApplication(NSAppleEventHandling) _handleAEOpenDocumentsForURLs:]_block_invoke_2 + 2114 (AppKit + 3534419) [0x7fff39b31e53]
> 86 +[_NSWindowTransformAnimation waitForAnimationToCompleteOnWindows:forFullScreen:] + 69 (AppKit + 3535118) [0x7fff39b3210e]
> 86 CA::Transaction::commit() + 596 (QuartzCore + 7846) [0x7fff46c80ea6]
> 86 CA::Context::commit_transaction(CA::Transaction*) + 342 (QuartzCore + 10182) [0x7fff46c817c6]
> 86 CA::Layer::display_if_needed(CA::Transaction*) + 627 (QuartzCore + 83281) [0x7fff46c93551]
> 86 -[_NSViewBackingLayer display] + 811 (AppKit + 1199183) [0x7fff398f7c4f]
> 86 _NSBackingLayerDisplay + 528 (AppKit + 1312590) [0x7fff3991374e]
> 86 -[CALayer _display] + 1830 (QuartzCore + 86048) [0x7fff46c94020]
> 86 invocation function for block in CA::Layer::display_() + 53 (QuartzCore + 489997) [0x7fff46cf6a0d]
> 86 CABackingStoreUpdate_ + 577 (QuartzCore + 89602) [0x7fff46c94e02]
> 86 -[NSView(NSLayerKitGlue) _drawViewBackingLayer:inContext:drawingHandler:] + 1720 (AppKit + 1315228) [0x7fff3991419c]
> 86 __46-[NSView(NSLayerKitGlue) drawLayer:inContext:]_block_invoke + 192 (AppKit + 1315903) [0x7fff3991443f]
> 86 -[NSView(NSInternal) _recursive:displayRectIgnoringOpacity:inContext:shouldChangeFontReferenceColor:stopAtLayerBackedViews:] + 1627 (AppKit + 1317548) [0x7fff39914aac]
> 86 _NSViewDrawRect + 66 (AppKit + 1323550) [0x7fff3991621e]
> 86 -[_NSRulerContentView drawRect:] + 157 (AppKit + 7773946) [0x7fff39f3cefa]
> 86 -[NSRulerView _drawContentRect:] + 233 (AppKit + 7770556) [0x7fff39f3c1bc]
> 86 -[NoodleLineNumberView drawHashMarksAndLabelsInRect:] + 345 (R + 338169) [0x10d0728f9]
> 86 -[NSLayoutManager glyphRangeForBoundingRect:inTextContainer:] + 67 (UIFoundation + 282386) [0x7fff62edef12]
> 86 -[NSLayoutManager(NSPrivate) _glyphRangeForBoundingRect:inTextContainer:fast:okToFillHoles:] + 4616 (UIFoundation + 287009) [0x7fff62ee0121]
> 86 -[NSLayoutManager(NSPrivate) _firstPassGlyphRangeForBoundingRect:inTextContainer:hintGlyphRange:okToFillHoles:] + 1364 (UIFoundation + 498785) [0x7fff62f13c61]
> 86 _NSFastFillAllLayoutHolesForGlyphRange + 1889 (UIFoundation + 366168) [0x7fff62ef3658]
> 86 _resizeTextViewsIfNeeded + 284 (UIFoundation + 490100) [0x7fff62f11a74]
> 86 -[NSLayoutManager(NSPrivate) _resizeTextViewForTextContainer:] + 1113 (UIFoundation + 74945) [0x7fff62eac4c1]
> 86 -[NSTextView setConstrainedFrameSize:] + 621 (AppKit + 573461) [0x7fff3985f015]
> 86 -[NSTextView setFrameSize:] + 138 (AppKit + 1248131) [0x7fff39903b83]
> 86 -[NSTextView(NSPrivate) _setFrameSize:forceScroll:] + 1055 (AppKit + 1249378) [0x7fff39904062]
> 86 -[NSView setFrameSize:] + 1548 (AppKit + 652565) [0x7fff39872515]
> 86 -[NSView(NSInternal) _updateLayerGeometryFromView] + 734 (AppKit + 504076) [0x7fff3984e10c]
> 86 -[NSView setNeedsDisplay:] + 79 (AppKit + 393481) [0x7fff39833109]
> 86 -[NSTextView setNeedsDisplayInRect:] + 41 (AppKit + 534811) [0x7fff3985591b]
> 86 -[NSTextView setNeedsDisplayInRect:avoidAdditionalLayout:] + 1205 (AppKit + 536024) [0x7fff39855dd8]
> 86 -[NSLayoutManager glyphRangeForBoundingRect:inTextContainer:] + 67 (UIFoundation + 282386) [0x7fff62edef12]
> 86 -[NSLayoutManager(NSPrivate) _glyphRangeForBoundingRect:inTextContainer:fast:okToFillHoles:] + 851 (UIFoundation + 283244) [0x7fff62edf26c]
> 86 -[NSLayoutManager(NSPrivate) _firstPassGlyphRangeForBoundingRect:inTextContainer:okToFillHoles:] + 1432 (UIFoundation + 288475) [0x7fff62ee06db]
> 86 _NSFastFillAllLayoutHolesForGlyphRange + 1631 (UIFoundation + 365910) [0x7fff62ef3556]
> 86 -[NSLayoutManager(NSPrivate) _fillLayoutHoleForCharacterRange:desiredNumberOfLines:isSoft:] + 756 (UIFoundation + 321587) [0x7fff62ee8833]
> 86 -[NSATSTypesetter layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:] + 812 (UIFoundation + 328746) [0x7fff62eea42a]
> 86 -[NSTypesetter layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:] + 241 (UIFoundation + 329229) [0x7fff62eea60d]
> 86 -[NSTypesetter _layoutGlyphsInLayoutManager:startingAtGlyphIndex:maxNumberOfLineFragments:maxCharacterIndex:nextGlyphIndex:nextCharacterIndex:] + 3010 (UIFoundation + 162895) [0x7fff62ec1c4f]
> 86 -[NSATSTypesetter layoutParagraphAtPoint:] + 627 (UIFoundation + 331753) [0x7fff62eeafe9]
> 86 -[NSTypesetter setLineFragmentRect:forGlyphRange:usedRect:baselineOffset:] + 245 (UIFoundation + 344350) [0x7fff62eee11e]
> 86 -[NSLayoutManager(NSPrivate) setLineFragmentRect:forGlyphRange:usedRect:baselineOffset:] + 85 (UIFoundation + 345173) [0x7fff62eee455]
> 86 -[NSLayoutManager setLineFragmentRect:forGlyphRange:usedRect:] + 350 (UIFoundation + 345566) [0x7fff62eee5de]
> 86 -[NSLayoutManager(NSPrivate) _updateUsageForTextContainer:addingUsedRect:] + 529 (UIFoundation + 193912) [0x7fff62ec9578]
> 86 -[NSLayoutManager(NSPrivate) _resizeTextViewForTextContainer:] + 1113 (UIFoundation + 74945) [0x7fff62eac4c1]
> 86 -[NSTextView setConstrainedFrameSize:] + 621 (AppKit + 573461) [0x7fff3985f015]
> 86 -[NSTextView setFrameSize:] + 138 (AppKit + 1248131) [0x7fff39903b83]
> 86 -[NSTextView(NSPrivate) _setFrameSize:forceScroll:] + 1055 (AppKit + 1249378) [0x7fff39904062]
> 86 -[NSView setFrameSize:] + 2168 (AppKit + 653185) [0x7fff39872781]
> 86 -[NSView _postFrameChangeNotification] + 82 (AppKit + 680910) [0x7fff398793ce]
> 86 -[NSClipView _reflectDocumentViewFrameChange] + 625 (AppKit + 1131099) [0x7fff398e725b]
> 86 __45-[NSClipView _reflectDocumentViewFrameChange]_block_invoke + 98 (AppKit + 1131622) [0x7fff398e7466]
> 86 -[NSScrollView reflectScrolledClipView:] + 918 (AppKit + 917312) [0x7fff398b2f40]
> 86 -[NSScrollView _tileWithoutRecursing] + 47 (AppKit + 920844) [0x7fff398b3d0c]
> 86 -[NSScrollView tile] + 708 (AppKit + 921722) [0x7fff398b407a]
> 86 -[NSScrollView _setContentViewFrame:] + 322 (AppKit + 936479) [0x7fff398b7a1f]
> 86 -[NSView setFrame:] + 478 (AppKit + 649541) [0x7fff39871945]
> 86 -[NSClipView setFrameSize:] + 425 (AppKit + 1119901) [0x7fff398e469d]
> 86 -[NSView setFrameSize:] + 1803 (AppKit + 652820) [0x7fff39872614]
> 86 -[NSView resizeSubviewsWithOldSize:] + 515 (AppKit + 677665) [0x7fff39878721]
> 86 -[NSView resizeWithOldSuperviewSize:] + 769 (AppKit + 678803) [0x7fff39878b93]
> 86 -[NSView setFrame:] + 478 (AppKit + 649541) [0x7fff39871945]
> 86 -[NSTextView setFrameSize:] + 138 (AppKit + 1248131) [0x7fff39903b83]
> 86 -[NSTextView(NSPrivate) _setFrameSize:forceScroll:] + 1249 (AppKit + 1249572) [0x7fff39904124]
> 86 -[NSLayoutManager boundingRectForGlyphRange:inTextContainer:] + 51 (UIFoundation + 529546) [0x7fff62f1b48a]
> 86 -[NSLayoutManager(NSPrivate) _boundingRectForGlyphRange:inTextContainer:fast:fullLineRectsOnly:] + 106 (UIFoundation + 475654) [0x7fff62f0e206]
> 86 -[NSLayoutManager(NSPrivate) _rectArrayForRange:withinSelectionRange:rangeIsCharRange:singleRectOnly:fullLineRectsOnly:inTextContainer:rectCount:rangeWithinContainer:glyphsDrawOutsideLines:] + 58 (UIFoundation + 1307872) [0x7fff62fd94e0]
> 86 -[NSLayoutManager(NSPrivate) _rectArrayForRange:withinSelectionRange:rangeIsCharRange:singleRectOnly:fullLineRectsOnly:inTextContainer:rectCount:rangeWithinContainer:glyphsDrawOutsideLines:rectArray:rectArrayCapacity:] + 729 (UIFoundation + 479726) [0x7fff62f0f1ee]
> 86 _NSFastFillAllLayoutHolesForGlyphRange + 1631 (UIFoundation + 365910) [0x7fff62ef3556]
> 86 -[NSLayoutManager(NSPrivate) _fillLayoutHoleForCharacterRange:desiredNumberOfLines:isSoft:] + 756 (UIFoundation + 321587) [0x7fff62ee8833]
> 86 -[NSATSTypesetter layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:] + 303 (UIFoundation + 328237) [0x7fff62eea22d]
> 86 -[NSATSTypesetter layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:] + 812 (UIFoundation + 328746) [0x7fff62eea42a]
> 86 -[NSTypesetter layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:] + 241 (UIFoundation + 329229) [0x7fff62eea60d]
> 86 -[NSTypesetter _layoutGlyphsInLayoutManager:startingAtGlyphIndex:maxNumberOfLineFragments:maxCharacterIndex:nextGlyphIndex:nextCharacterIndex:] + 2822 (UIFoundation + 162707) [0x7fff62ec1b93]
> 86 -[NSTypesetter _getRemainingNominalParagraphRange:andParagraphSeparatorRange:charactarIndex:layoutManager:string:] + 1315 (UIFoundation + 330648) [0x7fff62eeab98]
> 86 ??? [0]
> 86 _sigtramp + 29 (libsystem_platform.dylib + 19293) [0x7fff68365b5d]
> 86 sigactionSegv + 675 (main.c:623,9 in libR.dylib + 1115635) [0x10d2405f3]
> 86 Re_ReadConsole + 184 (R + 64840) [0x10d02fd48]
> 86 -[RController handleReadConsole:] + 158 (R + 27086) [0x10d0269ce]
> 86 -[RController doProcessEvents:] + 190 (R + 50046) [0x10d02c37e]
> 86 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1361 (AppKit + 103531) [0x7fff397ec46b]
> 86 _DPSNextEvent + 1135 (AppKit + 108413) [0x7fff397ed77d]
> 86 _BlockUntilNextEventMatchingListInModeWithFilter + 64 (HIToolbox + 44150) [0x7fff3b455c76]
> 86 ReceiveNextEventCommon + 603 (HIToolbox + 44773) [0x7fff3b455ee5]
> 86 RunCurrentEventLoopInMode + 292 (HIToolbox + 45483) [0x7fff3b4561ab]
> 86 CFRunLoopRunSpecific + 455 (CoreFoundation + 238930) [0x7fff3c1f7552]
> 86 __CFRunLoopRun + 2130 (CoreFoundation + 241654) [0x7fff3c1f7ff6]
> 86 __CFRunLoopDoTimers + 330 (CoreFoundation + 368098) [0x7fff3c216de2]
> 86 __CFRunLoopDoTimer + 851 (CoreFoundation + 369308) [0x7fff3c21729c]
> 86 __CFRUNLOOP_IS_CALLING_OUT_TO_A_TIMER_CALLBACK_FUNCTION__ + 20 (CoreFoundation + 370416) [0x7fff3c2176f0]
> 86 __NSFireDelayedPerform + 411 (Foundation + 414314) [0x7fff3e4a726a]
> 86 _NSFastFillAllLayoutHolesForGlyphRange + 1631 (UIFoundation + 365910) [0x7fff62ef3556]
> 86 -[NSLayoutManager(NSPrivate) _fillLayoutHoleForCharacterRange:desiredNumberOfLines:isSoft:] + 756 (UIFoundation + 321587) [0x7fff62ee8833]
> 86 -[NSATSTypesetter layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:] + 303 (UIFoundation + 328237) [0x7fff62eea22d]
> 86 -[NSATSTypesetter layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:] + 812 (UIFoundation + 328746) [0x7fff62eea42a]
> 86 -[NSTypesetter layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:] + 241 (UIFoundation + 329229) [0x7fff62eea60d]
> 86 -[NSTypesetter _layoutGlyphsInLayoutManager:startingAtGlyphIndex:maxNumberOfLineFragments:maxCharacterIndex:nextGlyphIndex:nextCharacterIndex:] + 2822 (UIFoundation + 162707) [0x7fff62ec1b93]
> 86 -[NSTypesetter _getRemainingNominalParagraphRange:andParagraphSeparatorRange:charactarIndex:layoutManager:string:] + 1315 (UIFoundation + 330648) [0x7fff62eeab98]
> 86 ??? [0]
>
>
> Powerstats for: R [10966]
> UUID: 0A358543-3A28-3D0C-AF38-A3820070A210
> Path: /Applications/R.app/Contents/MacOS/R
> Architecture: x86_64
> Parent: UNKNOWN [1]
> UID: 501
> Footprint: 460.71 MB
> Start time: 2020-09-21 14:47:26 +0100
> End time: 2020-09-21 14:48:56 +0100
> Num samples: 87 (100%)
> CPU Time: 89.589s
> Note: Unresponsive
> Primary state: 72 samples Non-Frontmost App, Non-Suppressed, Kernel mode, Effective Thread QoS User Interactive, Requested Thread QoS User Interactive, Override Thread QoS Unspecified
> User Activity: 0 samples Idle, 87 samples Active
> Power Source: 0 samples on Battery, 87 samples on AC
> 86 start + 1 (libdyld.dylib + 91093) [0x7fff6817a3d5]
> 86 main + 792 (R + 8120) [0x10d021fb8]
> 86 -[REngine runREPL] + 177 (R + 74833) [0x10d032451]
> 86 run_REngineRmainloop + 263 (R + 120903) [0x10d03d847]
> 86 R_ReplDLLdo1 + 148 (main.c:371,6 in libR.dylib + 1106276) [0x10d23e164]
> 86 Re_ReadConsole + 184 (R + 64840) [0x10d02fd48]
> 86 -[RController handleReadConsole:] + 158 (R + 27086) [0x10d0269ce]
> 86 -[RController doProcessEvents:] + 190 (R + 50046) [0x10d02c37e]
> 86 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1361 (AppKit + 103531) [0x7fff397ec46b]
> 86 _DPSNextEvent + 1935 (AppKit + 109213) [0x7fff397eda9d]
> 86 AEProcessAppleEvent + 54 (HIToolbox + 84151) [0x7fff3b45f8b7]
> 86 aeProcessAppleEvent + 414 (AE + 35585) [0x7fff3d41db01]
> 86 dispatchEventAndSendReply(AEDesc const*, AEDesc*) + 41 (AE + 35881) [0x7fff3d41dc29]
> 86 aeDispatchAppleEvent(AEDesc const*, AEDesc*, unsigned int, unsigned char*) + 1815 (AE + 37783) [0x7fff3d41e397]
> 86 _NSAppleEventManagerGenericHandler + 102 (Foundation + 374061) [0x7fff3e49d52d]
> 86 -[NSAppleEventManager dispatchRawAppleEvent:withRawReply:handlerRefCon:] + 286 (Foundation + 374448) [0x7fff3e49d6b0]
> 86 -[NSApplication(NSAppleEventHandling) _handleCoreEvent:withReplyEvent:] + 764 (AppKit + 124647) [0x7fff397f16e7]
> 86 -[NSApplication(NSAppleEventHandling) _handleAEOpenDocumentsForURLs:] + 228 (AppKit + 3479869) [0x7fff39b2493d]
> 86 __69-[NSApplication(NSAppleEventHandling) _handleAEOpenDocumentsForURLs:]_block_invoke + 886 (AppKit + 3480894) [0x7fff39b24d3e]
> 86 -[NSApplication(NSAppleEventHandling) _openURLs:withCompletionHandler:] + 998 (AppKit + 5152848) [0x7fff39cbd050]
> 86 withWindowOrderingObserverHeuristic + 472 (AppKit + 5153685)
>
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