[R-SIG-Mac] Can't open files in 4.0 or 4.01
Ben Haller
bh@||er @end|ng |rom m@c@com
Sun Jun 28 16:07:30 CEST 2020
Hi all. I’m not on 4.0.x yet, but have been reading this thread with interest.
It may be useful to know that you can sample a hung process on macOS with the “sample” command. If the R GUI is hung, just go to Terminal and type “sample R 10”. After a short delay, you’ll get backtraces of all threads dumped into your Terminal. My R 3.6.2 GUI, installed from CRAN not built from sources, appears to be symbolicated, so my backtraces have symbols in them even within the R GUI’s code. If the 4.0.x R GUI is also symbolicated (which I think is a good idea for all shipping apps nowadays, since the size of app binaries is so irrelevant in this day and age), your backtraces from it should also have symbols.
Cheers,
-B.
Benjamin C. Haller
Messer Lab
Cornell University
> On Jun 27, 2020, at 1:17 AM, Simon Urbanek <Simon.Urbanek using r-project.org> wrote:
>
> If it is a hang, can you get a stack trace? There are a few ways, if you're lucky, Apple may provide one directly when you to force-quite. Otherwise, you can download the GUI from mac.R-project.org, and use lldb -> attach xxx where xx is the PID of the GUI.
>
> Hangs are different from crashes, they are much more annoying to debug, because those can be some race conditions that result from the interactions of our event loop and the os internal events.
>
> Thanks,
> Simon
>
>
>> On Jun 27, 2020, at 4:15 AM, Carl Witthoft <carl using witthoft.com> wrote:
>>
>> Well, dang me if today I wasn't able to open a file in R. -- but only once or twice, and then I get the 100% CPU hang. Same result if I double-clike the file in Finder or use the R-menu "Open" dialog.
>>
>> R- version 4.01, and to my knowledge I didn't change anything of import in my Mac's system or set of applications.
>>
>> If you can suggest a logfile or other tool I can pull info from to show what happened, please do so.
>>
>> thanks
>> Carl
>>
>> On 6/24/20 5:32 PM, Brandon Hurr wrote:
>>> Simon,
>>> 1) Yes, I use homebrew for installing python/openCV and GIS stuff. I don't recognize the others mentioned and I have a few system extensions installed (discussed below).
>>> 2) I have been using Bob's Rswitch app recently and downloading the bundle rather than using the installer. The behavior is unchanged for me on two separate macs whether it's installed this way or not.
>>> Related to #1, I have two separate macs where this is happening and both more or less have the same software bundle from homebrew (and most other apps).
>>> brew list returns
>>> gdbm openssl using 1.1 python sqlite
>>> jhead pandoc readline xz
>>> I just wiped my homebrew install, rebooted, loaded an Rscript by double clicking into R-gui and its editor, then tried to load another script and it crashed R like before.
>>> The behavior is the same with
>>> * R 4.0.2 & R.app GUI 1.72 (7846) x86_64-apple-darwin17.0 for R 4.0
>>> o Installed via PKG
>>> * R 4.1.0 (2020-06-21 r78727) & R.app GUI 1.72 (7846)
>>> x86_64-apple-darwin17.0 for R 4.1
>>> o Installed via untar
>>> The only system extensions I see in my Sys Preferences are Google Drive, Dropbox, One Drive, and OneNote. I haven't ever used the OneNote one and rarely One Drive. Google Drive and Dropbox are installed and regularly syncing a few folders. R seems to crash when opening a second file regardless of where it is located (e.g. synced folder, non-synced folder, external drive, system drive, etc.). I exited all of these programs and tried again and it still happened.
>>> Anything else I should try or more information I could supply to narrow this down?
>>> Thanks,
>>> Brandon
>>> On Tue, Jun 23, 2020 at 5:02 PM Simon Urbanek <simon.urbanek using r-project.org <mailto:simon.urbanek using r-project.org>> wrote:
>>> Brandon,
>>> Thanks for your reports. I tested all Catalinas 10.15.3 through
>>> 10.15.5 and, frustratingly, I cannot replicate the issue. I tried
>>> opening documents of different sizes, multiple documents, even
>>> changing the "close windows when quitting the app" global setting
>>> and still no crash.
>>> There are a few posts that suggest the a crash on Open is not
>>> entirely uncommon on Catalina. There is no definite answer, but
>>> there are pointers to unnotarized parts/libraries loaded into a
>>> process. So one theory would be that users experiencing such issues
>>> have some 3rd part libraries or tools on the machine which are not
>>> notarized and cause the issue. So two comments from that:
>>> 1) do you have any 3rd party software that is not notarized? (like
>>> Homebrew, Haxxies, UI-plugins or similar) If so try to remove them
>>> (or rename their directories).
>>> 2) try using the unnotarized version of R to see if the problem
>>> persists - see R for Mac FAQ 10.17:
>>> https://cran.r-project.org/bin/macosx/RMacOSX-FAQ.html#I-cannot-attach-debugger-to-R
>>> Thanks,
>>> Simon
>>>> On Jun 9, 2020, at 2:39 AM, Brandon Hurr <brandon.hurr using gmail.com
>>> <mailto:brandon.hurr using gmail.com>> wrote:
>>>>
>>>> Simon,
>>>>
>>>> When I removed these two I did get a slightly different behavior
>>> on my MBA.
>>>> In the past I would get the pinwheel of death and R would peg at
>>> 100%, but
>>>> now when I try and load a second file it simply crashes R
>>> immediately.
>>>> Debug Console log here:
>>>> https://gist.github.com/bhive01/1421f464ce5d345644878cd41309f647
>>>> Separately I loaded up R from my applications folder and then
>>> clicked on a
>>>> file to load it and it did the same thing:
>>>> https://gist.github.com/bhive01/d7791d0070a43d73de2489f6cab9211f
>>>> The same crashing behavior if you load it from the Open Recents
>>> in the menu:
>>>> https://gist.github.com/bhive01/1bae74d6cbcbb8c014415d47ac9fe456
>>>>
>>>> In the first instance I double clicked the file from Finder and
>>> it would
>>>> open with R-GUI/R. But a second file would not, once R was loaded.
>>>>
>>>> I don't know if that gets us any closer, but apparently there is some
>>>> difference in that it crashes immediately rather than a pinwheel
>>> of death.
>>>> The only thing I can think of is that I did have my own custom color
>>>> palette and you reference changing the color scheme. Seems
>>> unlikely, but
>>>> perhaps there's a connection there?
>>>> As Carl says, I'm happy to try other things if you have
>>> suggestions or have
>>>> ideas on more information. I've been using BBEdit to open other
>>> scripts,
>>>> but often forget and end up with a crash because I double-click
>>> on a file.
>>>> I might try to get BBEdit to work with R more intimately as Carl
>>> pointed
>>>> out.
>>>>
>>>> B
>>>>
>>>> On Sun, Jun 7, 2020 at 3:46 PM Simon Urbanek
>>> <simon.urbanek using r-project.org <mailto:simon.urbanek using r-project.org>>
>>>> wrote:
>>>>
>>>>> Thanks for the reports. Unfortunately, I still cannot reproduce
>>> it on
>>>>> Catalina - neither with 4.0.1 nor 4.0.0.
>>>>> Can someone post exactly how to replicate? (How do exactly you
>>> open the
>>>>> file? - the Open dialog works fine for me...)
>>>>>
>>>>> Note that the GUI is independent of R and compatible up to the patch
>>>>> version, i.e. the 4.0.0 GUI works with R 4.0.1 and vice-versa.
>>> You can also
>>>>> just download the GUI from
>>>>> https://mac.R-project.org
>>>>> and run it from the image, you don’t even have to install it.
>>>>>
>>>>> The only changes in the GUI for 4.0.1 were in the colours for
>>> dark mode,
>>>>> so file handling behaviour didn’t really change.
>>>>>
>>>>> Some places to remove to try if it has any effect:
>>>>>
>>>>> rm -rf ~/Library/Caches/org.R-project.R
>>>>> rm ~/Library/Preferences/org.R-project.R.plist
>>>>>
>>>>> Thanks,
>>>>> Simon
>>>>>
>>>>>
>>>>>
>>>>>> On Jun 8, 2020, at 10:22 AM, Brandon Hurr
>>> <brandon.hurr using gmail.com <mailto:brandon.hurr using gmail.com>>
>>>>> wrote:
>>>>>>
>>>>>> This sounds exactly like the issue I am still having when I run
>>> to open
>>>>>> more than one R script file in R-GUI’s editor. Perhaps it has
>>> got worse
>>>>>> with the newer builds?
>>>>>>
>>>>>> On Sun, Jun 7, 2020 at 15:16 Carl Witthoft <carl using witthoft.com
>>> <mailto:carl using witthoft.com>> wrote:
>>>>>>
>>>>>>> I'm not sure what to look for in the Reports sections of
>>> Console.app,
>>>>>>> but I did find this report of R exceeding a diagnostic limit
>>> of CPU
>>>>>>> usage, which most likely is related to one of the hangs -
>>> R.app always
>>>>>>> goes full throttle on one CPU core.
>>>>>>>
>>>>>>> Date/Time: 2020-06-05 18:58:36 -0400
>>>>>>> End time: 2020-06-05 19:00:16 -0400
>>>>>>> OS Version: Mac OS X 10.15.5 (Build 19F101)
>>>>>>> Architecture: x86_64h
>>>>>>> Report Version: 29
>>>>>>> Incident Identifier: E3BE34D3-09C5-4AA9-A89D-A9E5F8F0EB6B
>>>>>>>
>>>>>>> Data Source: Microstackshots
>>>>>>> Shared Cache: 0x3868000 57B2E2F3-10A7-3AAD-AC94-975B957DF535
>>>>>>>
>>>>>>> Command: R
>>>>>>> Path: /Applications/R.app/Contents/MacOS/R
>>>>>>> Identifier: org.R-project.R
>>>>>>> Version: R 4.0.0 GUI 1.71 Catalina build (7827)
>>>>>>> PID: 21391
>>>>>>>
>>>>>>> Event: cpu usage
>>>>>>> Action taken: none
>>>>>>> CPU: 90 seconds cpu time over 100 seconds (90% cpu
>>>>>>> average), exceeding limit of 50% cpu over 180 seconds
>>>>>>> CPU limit: 90s
>>>>>>> Limit duration: 180s
>>>>>>> CPU used: 90s
>>>>>>> CPU duration: 100s
>>>>>>> Duration: 100.35s
>>>>>>> Duration Sampled: 87.74s
>>>>>>> Steps: 51
>>>>>>>
>>>>>>> Hardware model: iMac19,2
>>>>>>> Active cpus: 4
>>>>>>>
>>>>>>> Fan speed: 1200 rpm
>>>>>>>
>>>>>>> Heaviest stack for the target process:
>>>>>>> 51 start + 1 (libdyld.dylib + 109769) [0x7fff6a9b1cc9]
>>>>>>> 51 main + 720 (R + 8032) [0x105c66f60]
>>>>>>> 51 -[NSApplication finishLaunching] + 2601 (AppKit + 207160)
>>>>>>> [0x7fff2dc1c938]
>>>>>>> 51 -[NSApplication _postDidFinishNotification] + 312 (AppKit +
>>>>>>> 306403) [0x7fff2dc34ce3]
>>>>>>> 51 -[NSNotificationCenter
>>> postNotificationName:object:userInfo:] +
>>>>>>> 59 (Foundation + 38790) [0x7fff32ff6786]
>>>>>>> 51 _CFXNotificationPost + 1351 (CoreFoundation + 297529)
>>>>>>> [0x7fff3097ba39]
>>>>>>> 51 -[_CFXNotificationRegistrar
>>> find:object:observer:enumerator:] +
>>>>>>> 1554 (CoreFoundation + 300429) [0x7fff3097c58d]
>>>>>>> 51 ___CFXNotificationPost_block_invoke + 80 (CoreFoundation +
>>>>>>> 496660) [0x7fff309ac414]
>>>>>>> 51 _CFXRegistrationPost1 + 372 (CoreFoundation + 497576)
>>>>>>> [0x7fff309ac7a8]
>>>>>>> 51 ___CFXRegistrationPost1_block_invoke + 63 (CoreFoundation +
>>>>>>> 497715) [0x7fff309ac833]
>>>>>>> 51 __CFNOTIFICATIONCENTER_IS_CALLING_OUT_TO_AN_OBSERVER__ + 12
>>>>>>> (CoreFoundation + 497823) [0x7fff309ac89f]
>>>>>>> 51 -[RController applicationDidFinishLaunching:] + 1176 (R +
>>> 15960)
>>>>>>> [0x105c68e58]
>>>>>>> 51 -[REngine executeString:] + 286 (R + 76926) [0x105c77c7e]
>>>>>>> 51 -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 212
>>> (Foundation +
>>>>>>> 393672) [0x7fff3304d1c8]
>>>>>>> 51 CFRunLoopRunSpecific + 462 (CoreFoundation + 532174)
>>>>>>> [0x7fff309b4ece]
>>>>>>> 51 __CFRunLoopRun + 874 (CoreFoundation + 534677)
>>> [0x7fff309b5895]
>>>>>>> 51 __CFRunLoopDoObservers + 457 (CoreFoundation + 537335)
>>>>>>> [0x7fff309b62f7]
>>>>>>> 51 __CFRUNLOOP_IS_CALLING_OUT_TO_AN_OBSERVER_CALLBACK_FUNCTION__ +
>>>>>>> 23 (CoreFoundation + 537541) [0x7fff309b63c5]
>>>>>>> 51 ___NSRunLoopObserverCreateWithHandler_block_invoke + 41
>>> (AppKit +
>>>>>>> 9439312) [0x7fff2e4ea850]
>>>>>>> 51 __62+[CATransaction(NSCATransaction)
>>>>>>> NS_setFlushesWithDisplayLink]_block_invoke + 266 (AppKit +
>>> 1971601)
>>>>>>> [0x7fff2ddcb591]
>>>>>>> 51 CA::Transaction::commit() + 644 (QuartzCore + 8352)
>>>>> [0x7fff3c47a0a0]
>>>>>>> 51 CA::Context::commit_transaction(CA::Transaction*, double)
>>> + 334
>>>>>>> (QuartzCore + 13494) [0x7fff3c47b4b6]
>>>>>>> 51 CA::Layer::display_if_needed(CA::Transaction*) + 757
>>> (QuartzCore
>>>>>>> + 152061) [0x7fff3c49d1fd]
>>>>>>> 51 -[_NSViewBackingLayer display] + 800 (AppKit + 1231223)
>>>>>>> [0x7fff2dd16977]
>>>>>>> 51 -[_NSBackingLayer display] + 537 (AppKit + 1879690)
>>>>> [0x7fff2ddb4e8a]
>>>>>>> 51 -[CALayer _display] + 2103 (QuartzCore + 156002)
>>> [0x7fff3c49e162]
>>>>>>> 51 invocation function for block in CA::Layer::display_() + 53
>>>>>>> (QuartzCore + 550873) [0x7fff3c4fe7d9]
>>>>>>> 51 CABackingStoreUpdate_ + 595 (QuartzCore + 158813)
>>> [0x7fff3c49ec5d]
>>>>>>> 51 -[NSView(NSLayerKitGlue)
>>>>>>> _drawViewBackingLayer:inContext:drawingHandler:] + 1271 (AppKit +
>>>>>>> 1881242) [0x7fff2ddb549a]
>>>>>>> 51 -[NSView(NSInternal)
>>>>>>>
>>> _recursive:displayRectIgnoringOpacity:inContext:stopAtLayerBackedViews:]
>>>>>>> + 2170 (AppKit + 1884318) [0x7fff2ddb609e]
>>>>>>> 51 _NSViewDrawRect + 139 (AppKit + 1887631) [0x7fff2ddb6d8f]
>>>>>>> 51 -[_NSRulerContentView drawRect:] + 157 (AppKit + 7667047)
>>>>>>> [0x7fff2e339d67]
>>>>>>> 51 -[NSRulerView _drawContentRect:] + 233 (AppKit + 7663663)
>>>>>>> [0x7fff2e33902f]
>>>>>>> 51 -[NoodleLineNumberView drawHashMarksAndLabelsInRect:] +
>>> 345 (R +
>>>>>>> 338153) [0x105cb78e9]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _glyphRangeForBoundingRect:inTextContainer:fast:okToFillHoles:] + 857
>>>>>>> (UIFoundation + 336155) [0x7fff61a0411b]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _firstPassGlyphRangeForBoundingRect:inTextContainer:okToFillHoles:] +
>>>>>>> 1441 (UIFoundation + 341594) [0x7fff61a0565a]
>>>>>>> 51 _NSFastFillAllLayoutHolesForGlyphRange + 1863 (UIFoundation +
>>>>>>> 202864) [0x7fff619e3870]
>>>>>>> 51 _resizeTextViewsIfNeeded + 284 (UIFoundation + 427013)
>>>>>>> [0x7fff61a1a405]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>> _resizeTextViewForTextContainer:] +
>>>>>>> 1103 (UIFoundation + 144184) [0x7fff619d5338]
>>>>>>> 51 -[NSTextView setConstrainedFrameSize:] + 591 (AppKit +
>>> 1539771)
>>>>>>> [0x7fff2dd61ebb]
>>>>>>> 51 -[NSTextView setFrameSize:] + 145 (AppKit + 2123877)
>>>>>>> [0x7fff2ddf0865]
>>>>>>> 51 -[NSTextView(NSPrivate) _setFrameSize:forceScroll:] + 962
>>> (AppKit
>>>>>>> + 2125105) [0x7fff2ddf0d31]
>>>>>>> 51 -[NSView setFrameSize:] + 1800 (AppKit + 501964)
>>> [0x7fff2dc648cc]
>>>>>>> 51 -[NSView(NSInternal) _updateLayerGeometryFromView] + 776
>>> (AppKit
>>>>>>> + 402692) [0x7fff2dc4c504]
>>>>>>> 51 -[NSView setNeedsDisplay:] + 52 (AppKit + 395124)
>>> [0x7fff2dc4a774]
>>>>>>> 51 -[NSTextView
>>> setNeedsDisplayInRect:avoidAdditionalLayout:] + 1040
>>>>>>> (AppKit + 1536469) [0x7fff2dd611d5]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _glyphRangeForBoundingRect:inTextContainer:fast:okToFillHoles:] + 857
>>>>>>> (UIFoundation + 336155) [0x7fff61a0411b]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _firstPassGlyphRangeForBoundingRect:inTextContainer:okToFillHoles:] +
>>>>>>> 1441 (UIFoundation + 341594) [0x7fff61a0565a]
>>>>>>> 51 _NSFastFillAllLayoutHolesForGlyphRange + 1596 (UIFoundation +
>>>>>>> 202597) [0x7fff619e3765]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>> _fillLayoutHoleForCharacterRange:desiredNumberOfLines:isSoft:]
>>> + 1106
>>>>>>> (UIFoundation + 390033) [0x7fff61a11391]
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 815 (UIFoundation + 396679) [0x7fff61a12d87]
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 241 (UIFoundation + 397071) [0x7fff61a12f0f]
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _layoutGlyphsInLayoutManager:startingAtGlyphIndex:maxNumberOfLineFragments:maxCharacterIndex:nextGlyphIndex:nextCharacterIndex:]
>>>>>>>
>>>>>>> + 3120 (UIFoundation + 94425) [0x7fff619c90d9]
>>>>>>> 51 -[NSATSTypesetter layoutParagraphAtPoint:] + 181
>>> (UIFoundation +
>>>>>>> 399167) [0x7fff61a1373f]
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>>>>
>>> _layoutLineFragmentStartingWithGlyphAtIndex:characterIndex:atPoint:renderingContext:]
>>>>>>>
>>>>>>> + 6960 (UIFoundation + 285726) [0x7fff619f7c1e]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>> setLineFragmentRect:forGlyphRange:usedRect:baselineOffset:] + 85
>>>>>>> (UIFoundation + 413988) [0x7fff61a17124]
>>>>>>> 51 -[NSLayoutManager
>>> setLineFragmentRect:forGlyphRange:usedRect:] +
>>>>>>> 328 (UIFoundation + 414361) [0x7fff61a17299]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>> _updateUsageForTextContainer:addingUsedRect:] + 529
>>> (UIFoundation +
>>>>>>> 123653) [0x7fff619d0305]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>> _resizeTextViewForTextContainer:] +
>>>>>>> 1103 (UIFoundation + 144184) [0x7fff619d5338]
>>>>>>> 51 -[NSTextView setConstrainedFrameSize:] + 591 (AppKit +
>>> 1539771)
>>>>>>> [0x7fff2dd61ebb]
>>>>>>> 51 -[NSTextView setFrameSize:] + 145 (AppKit + 2123877)
>>>>>>> [0x7fff2ddf0865]
>>>>>>> 51 -[NSTextView(NSPrivate) _setFrameSize:forceScroll:] + 962
>>> (AppKit
>>>>>>> + 2125105) [0x7fff2ddf0d31]
>>>>>>> 51 -[NSView setFrameSize:] + 3248 (AppKit + 503412)
>>> [0x7fff2dc64e74]
>>>>>>> 51 -[NSView _postFrameChangeNotification] + 82 (AppKit + 532785)
>>>>>>> [0x7fff2dc6c131]
>>>>>>> 51 -[NSClipView _reflectDocumentViewFrameChange] + 634 (AppKit +
>>>>>>> 812362) [0x7fff2dcb054a]
>>>>>>> 51 __45-[NSClipView
>>> _reflectDocumentViewFrameChange]_block_invoke +
>>>>>>> 95 (AppKit + 812882) [0x7fff2dcb0752]
>>>>>>> 51 -[NSScrollView reflectScrolledClipView:] + 774 (AppKit +
>>> 876231)
>>>>>>> [0x7fff2dcbfec7]
>>>>>>> 51 -[NSScrollView _tileWithoutRecursing] + 35 (AppKit + 939709)
>>>>>>> [0x7fff2dccf6bd]
>>>>>>> 51 -[NSScrollView tile] + 680 (AppKit + 940418) [0x7fff2dccf982]
>>>>>>> 51 -[NSScrollView _setContentViewFrame:] + 328 (AppKit + 953695)
>>>>>>> [0x7fff2dcd2d5f]
>>>>>>> 51 -[NSView setFrame:] + 423 (AppKit + 575534) [0x7fff2dc7682e]
>>>>>>> 51 -[NSClipView setFrameSize:] + 425 (AppKit + 810307)
>>>>> [0x7fff2dcafd43]
>>>>>>> 51 -[NSView setFrameSize:] + 2045 (AppKit + 502209)
>>> [0x7fff2dc649c1]
>>>>>>> 51 -[NSView resizeSubviewsWithOldSize:] + 525 (AppKit + 652445)
>>>>>>> [0x7fff2dc8949d]
>>>>>>> 51 -[NSView resizeWithOldSuperviewSize:] + 1178 (AppKit +
>>> 654713)
>>>>>>> [0x7fff2dc89d79]
>>>>>>> 51 -[NSView setFrame:] + 423 (AppKit + 575534) [0x7fff2dc7682e]
>>>>>>> 51 -[NSTextView setFrameSize:] + 145 (AppKit + 2123877)
>>>>>>> [0x7fff2ddf0865]
>>>>>>> 51 -[NSTextView(NSPrivate) _setFrameSize:forceScroll:] + 1130
>>>>>>> (AppKit + 2125273) [0x7fff2ddf0dd9]
>>>>>>> 51 -[NSLayoutManager
>>> boundingRectForGlyphRange:inTextContainer:] +
>>>>>>> 47 (UIFoundation + 451356) [0x7fff61a2031c]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _boundingRectForGlyphRange:inTextContainer:fast:fullLineRectsOnly:] +
>>>>>>> 108 (UIFoundation + 432612) [0x7fff61a1b9e4]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>>>>
>>> _rectArrayForRange:withinSelectionRange:rangeIsCharRange:singleRectOnly:fullLineRectsOnly:inTextContainer:rectCount:rangeWithinContainer:glyphsDrawOutsideLines:]
>>>>>>>
>>>>>>> + 58 (UIFoundation + 1820289) [0x7fff61b6e681]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>>>>
>>> _rectArrayForRange:withinSelectionRange:rangeIsCharRange:singleRectOnly:fullLineRectsOnly:inTextContainer:rectCount:rangeWithinContainer:glyphsDrawOutsideLines:rectArray:rectArrayCapacity:]
>>>>>>>
>>>>>>> + 748 (UIFoundation + 192486) [0x7fff619e0fe6]
>>>>>>> 51 _NSFastFillAllLayoutHolesForGlyphRange + 1596 (UIFoundation +
>>>>>>> 202597) [0x7fff619e3765]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>> _fillLayoutHoleForCharacterRange:desiredNumberOfLines:isSoft:]
>>> + 1106
>>>>>>> (UIFoundation + 390033) [0x7fff61a11391]
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 283 (UIFoundation + 396147) [0x7fff61a12b73]
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 815 (UIFoundation + 396679) [0x7fff61a12d87]
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 241 (UIFoundation + 397071) [0x7fff61a12f0f]
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _layoutGlyphsInLayoutManager:startingAtGlyphIndex:maxNumberOfLineFragments:maxCharacterIndex:nextGlyphIndex:nextCharacterIndex:]
>>>>>>>
>>>>>>> + 2950 (UIFoundation + 94255) [0x7fff619c902f]
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _getRemainingNominalParagraphRange:andParagraphSeparatorRange:charactarIndex:layoutManager:string:]
>>>>>>>
>>>>>>> + 1233 (UIFoundation + 398399) [0x7fff61a1343f]
>>>>>>> 51 ??? [0]
>>>>>>> 51 _sigtramp + 29 (libsystem_platform.dylib + 13821)
>>> [0x7fff6abaa5fd]
>>>>>>> 51 sigactionSegv + 675 (main.c:623,9 in libR.dylib + 1115667)
>>>>>>> [0x105e89613]
>>>>>>> 51 Re_ReadConsole + 184 (R + 64824) [0x105c74d38]
>>>>>>> 51 -[RController handleReadConsole:] + 158 (R + 27070)
>>> [0x105c6b9be]
>>>>>>> 51 -[RController doProcessEvents:] + 190 (R + 50030)
>>> [0x105c7136e]
>>>>>>> 51 -[NSApplication(NSEvent)
>>>>>>> _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
>>> (AppKit +
>>>>>>> 262256) [0x7fff2dc2a070]
>>>>>>> 51 _DPSNextEvent + 883 (AppKit + 268329) [0x7fff2dc2b829]
>>>>>>> 51 _BlockUntilNextEventMatchingListInModeWithFilter + 64
>>> (HIToolbox
>>>>>>> + 193913) [0x7fff2f5e3579]
>>>>>>> 51 ReceiveNextEventCommon + 584 (HIToolbox + 194517)
>>> [0x7fff2f5e37d5]
>>>>>>> 51 RunCurrentEventLoopInMode + 292 (HIToolbox + 195261)
>>>>>>> [0x7fff2f5e3abd]
>>>>>>> 51 CFRunLoopRunSpecific + 462 (CoreFoundation + 532174)
>>>>>>> [0x7fff309b4ece]
>>>>>>> 51 __CFRunLoopRun + 1871 (CoreFoundation + 535674)
>>> [0x7fff309b5c7a]
>>>>>>> 51 __CFRunLoopDoTimers + 322 (CoreFoundation + 646871)
>>>>> [0x7fff309d0ed7]
>>>>>>> 51 __CFRunLoopDoTimer + 859 (CoreFoundation + 648175)
>>>>> [0x7fff309d13ef]
>>>>>>> 51 __CFRUNLOOP_IS_CALLING_OUT_TO_A_TIMER_CALLBACK_FUNCTION__
>>> + 20
>>>>>>> (CoreFoundation + 649353) [0x7fff309d1889]
>>>>>>> 51 __NSFireDelayedPerform + 415 (Foundation + 636642)
>>>>> [0x7fff330886e2]
>>>>>>> 51 _NSFastFillAllLayoutHolesForGlyphRange + 1596 (UIFoundation +
>>>>>>> 202597) [0x7fff619e3765]
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>> _fillLayoutHoleForCharacterRange:desiredNumberOfLines:isSoft:]
>>> + 1106
>>>>>>> (UIFoundation + 390033) [0x7fff61a11391]
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 283 (UIFoundation + 396147) [0x7fff61a12b73]
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 815 (UIFoundation + 396679) [0x7fff61a12d87]
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 241 (UIFoundation + 397071) [0x7fff61a12f0f]
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _layoutGlyphsInLayoutManager:startingAtGlyphIndex:maxNumberOfLineFragments:maxCharacterIndex:nextGlyphIndex:nextCharacterIndex:]
>>>>>>>
>>>>>>> + 2950 (UIFoundation + 94255) [0x7fff619c902f]
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _getRemainingNominalParagraphRange:andParagraphSeparatorRange:charactarIndex:layoutManager:string:]
>>>>>>>
>>>>>>> + 1233 (UIFoundation + 398399) [0x7fff61a1343f]
>>>>>>> 51 ??? [0]
>>>>>>>
>>>>>>>
>>>>>>> Powerstats for: R [21391]
>>>>>>> UUID: 1C907587-5382-3CF9-B969-656D72C6C435
>>>>>>> Path: /Applications/R.app/Contents/MacOS/R
>>>>>>> Architecture: x86_64
>>>>>>> Footprint: 117.00 MB -> 95.42 MB (-21.57 MB)
>>>>>>> Start time: 2020-06-05 18:58:48 -0400
>>>>>>> End time: 2020-06-05 19:00:16 -0400
>>>>>>> Num samples: 51 (100%)
>>>>>>> CPU Time: 87.750s
>>>>>>> Primary state: 26 samples Non-Frontmost App,
>>> Non-Suppressed, Kernel
>>>>>>> mode, Effective Thread QoS User Interactive, Requested Thread
>>> QoS User
>>>>>>> Interactive, Override Thread QoS Unspecified
>>>>>>> User Activity: 0 samples Idle, 51 samples Active
>>>>>>> Power Source: 0 samples on Battery, 51 samples on AC
>>>>>>> 51 start + 1 (libdyld.dylib + 109769) [0x7fff6a9b1cc9]
>>>>>>> 51 main + 720 (R + 8032) [0x105c66f60]
>>>>>>> 51 -[NSApplication finishLaunching] + 2601 (AppKit + 207160)
>>>>>>> [0x7fff2dc1c938]
>>>>>>> 51 -[NSApplication _postDidFinishNotification] + 312
>>> (AppKit +
>>>>>>> 306403) [0x7fff2dc34ce3]
>>>>>>> 51 -[NSNotificationCenter
>>>>>>> postNotificationName:object:userInfo:] + 59 (Foundation + 38790)
>>>>>>> [0x7fff32ff6786]
>>>>>>> 51 _CFXNotificationPost + 1351 (CoreFoundation +
>>> 297529)
>>>>>>> [0x7fff3097ba39]
>>>>>>> 51 -[_CFXNotificationRegistrar
>>>>>>> find:object:observer:enumerator:] + 1554 (CoreFoundation + 300429)
>>>>>>> [0x7fff3097c58d]
>>>>>>> 51 ___CFXNotificationPost_block_invoke + 80
>>>>>>> (CoreFoundation + 496660) [0x7fff309ac414]
>>>>>>> 51 _CFXRegistrationPost1 + 372 (CoreFoundation +
>>>>>>> 497576) [0x7fff309ac7a8]
>>>>>>> 51 ___CFXRegistrationPost1_block_invoke + 63
>>>>>>> (CoreFoundation + 497715) [0x7fff309ac833]
>>>>>>> 51
>>>>>>> __CFNOTIFICATIONCENTER_IS_CALLING_OUT_TO_AN_OBSERVER__ + 12
>>>>>>> (CoreFoundation + 497823) [0x7fff309ac89f]
>>>>>>> 51 -[RController
>>>>>>> applicationDidFinishLaunching:] + 1176 (R + 15960) [0x105c68e58]
>>>>>>> 51 -[REngine executeString:] + 286 (R +
>>>>>>> 76926) [0x105c77c7e]
>>>>>>> 51 -[NSRunLoop(NSRunLoop)
>>>>>>> runMode:beforeDate:] + 212 (Foundation + 393672) [0x7fff3304d1c8]
>>>>>>> 51 CFRunLoopRunSpecific + 462
>>>>>>> (CoreFoundation + 532174) [0x7fff309b4ece]
>>>>>>> 51 __CFRunLoopRun + 874
>>>>>>> (CoreFoundation + 534677) [0x7fff309b5895]
>>>>>>> 51 __CFRunLoopDoObservers + 457
>>>>>>> (CoreFoundation + 537335) [0x7fff309b62f7]
>>>>>>> 51
>>>>>>> __CFRUNLOOP_IS_CALLING_OUT_TO_AN_OBSERVER_CALLBACK_FUNCTION__ + 23
>>>>>>> (CoreFoundation + 537541) [0x7fff309b63c5]
>>>>>>> 51
>>>>>>> ___NSRunLoopObserverCreateWithHandler_block_invoke + 41 (AppKit +
>>>>>>> 9439312) [0x7fff2e4ea850]
>>>>>>> 51
>>>>>>> __62+[CATransaction(NSCATransaction)
>>>>>>> NS_setFlushesWithDisplayLink]_block_invoke + 266 (AppKit +
>>> 1971601)
>>>>>>> [0x7fff2ddcb591]
>>>>>>> 51 CA::Transaction::commit()
>>>>>>> + 644 (QuartzCore + 8352) [0x7fff3c47a0a0]
>>>>>>> 51
>>>>>>> CA::Context::commit_transaction(CA::Transaction*, double) + 334
>>>>>>> (QuartzCore + 13494) [0x7fff3c47b4b6]
>>>>>>> 51
>>>>>>> CA::Layer::display_if_needed(CA::Transaction*) + 757 (QuartzCore +
>>>>>>> 152061) [0x7fff3c49d1fd]
>>>>>>> 51
>>>>>>> -[_NSViewBackingLayer display] + 800 (AppKit + 1231223)
>>> [0x7fff2dd16977]
>>>>>>> 51 -[_NSBackingLayer
>>>>>>> display] + 537 (AppKit + 1879690) [0x7fff2ddb4e8a]
>>>>>>> 51 -[CALayer
>>>>>>> _display] + 2103 (QuartzCore + 156002) [0x7fff3c49e162]
>>>>>>> 51 invocation
>>>>>>> function for block in CA::Layer::display_() + 53 (QuartzCore +
>>> 550873)
>>>>>>> [0x7fff3c4fe7d9]
>>>>>>> �� 51
>>>>>>> CABackingStoreUpdate_ + 595 (QuartzCore + 158813) [0x7fff3c49ec5d]
>>>>>>> 51
>>>>>>> -[NSView(NSLayerKitGlue)
>>>>>>> _drawViewBackingLayer:inContext:drawingHandler:] + 1271 (AppKit +
>>>>>>> 1881242) [0x7fff2ddb549a]
>>>>>>> 51
>>>>>>> -[NSView(NSInternal)
>>>>>>>
>>> _recursive:displayRectIgnoringOpacity:inContext:stopAtLayerBackedViews:]
>>>>>>> + 2170 (AppKit + 1884318) [0x7fff2ddb609e]
>>>>>>> 51
>>>>>>> _NSViewDrawRect + 139 (AppKit + 1887631) [0x7fff2ddb6d8f]
>>>>>>> 51
>>>>>>> -[_NSRulerContentView drawRect:] + 157 (AppKit + 7667047)
>>>>> [0x7fff2e339d67]
>>>>>>> 51
>>>>>>> -[NSRulerView _drawContentRect:] + 233 (AppKit + 7663663)
>>>>> [0x7fff2e33902f]
>>>>>>> 51
>>>>>>> -[NoodleLineNumberView drawHashMarksAndLabelsInRect:] + 345 (R
>>> + 338153)
>>>>>>> [0x105cb78e9]
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _glyphRangeForBoundingRect:inTextContainer:fast:okToFillHoles:] + 857
>>>>>>> (UIFoundation + 336155) [0x7fff61a0411b]
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _firstPassGlyphRangeForBoundingRect:inTextContainer:okToFillHoles:] +
>>>>>>> 1441 (UIFoundation + 341594) [0x7fff61a0565a]
>>>>>>>
>>>>>>> 51 _NSFastFillAllLayoutHolesForGlyphRange + 1863 (UIFoundation +
>>>>>>> 202864) [0x7fff619e3870]
>>>>>>>
>>>>>>> 51 _resizeTextViewsIfNeeded + 284 (UIFoundation + 427013)
>>>>>>> [0x7fff61a1a405]
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>> _resizeTextViewForTextContainer:] + 1103 (UIFoundation + 144184)
>>>>>>> [0x7fff619d5338]
>>>>>>>
>>>>>>> 51 -[NSTextView setConstrainedFrameSize:] + 591 (AppKit +
>>>>>>> 1539771) [0x7fff2dd61ebb]
>>>>>>>
>>>>>>> 51 -[NSTextView setFrameSize:] + 145 (AppKit + 2123877)
>>>>>>> [0x7fff2ddf0865]
>>>>>>>
>>>>>>> 51 -[NSTextView(NSPrivate)
>>> _setFrameSize:forceScroll:] +
>>>>>>> 962 (AppKit + 2125105) [0x7fff2ddf0d31]
>>>>>>>
>>>>>>> 51 -[NSView setFrameSize:] + 1800 (AppKit + 501964)
>>>>>>> [0x7fff2dc648cc]
>>>>>>>
>>>>>>> 51 -[NSView(NSInternal)
>>> _updateLayerGeometryFromView]
>>>>>>> + 776 (AppKit + 402692) [0x7fff2dc4c504]
>>>>>>>
>>>>>>> 51 -[NSView setNeedsDisplay:] + 52 (AppKit +
>>> 395124)
>>>>>>> [0x7fff2dc4a774]
>>>>>>>
>>>>>>> 51 -[NSTextView
>>>>>>> setNeedsDisplayInRect:avoidAdditionalLayout:] + 1040 (AppKit +
>>> 1536469)
>>>>>>> [0x7fff2dd611d5]
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _glyphRangeForBoundingRect:inTextContainer:fast:okToFillHoles:] + 857
>>>>>>> (UIFoundation + 336155) [0x7fff61a0411b]
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _firstPassGlyphRangeForBoundingRect:inTextContainer:okToFillHoles:] +
>>>>>>> 1441 (UIFoundation + 341594) [0x7fff61a0565a]
>>>>>>>
>>>>>>> 51 _NSFastFillAllLayoutHolesForGlyphRange +
>>>>>>> 1596 (UIFoundation + 202597) [0x7fff619e3765]
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>> _fillLayoutHoleForCharacterRange:desiredNumberOfLines:isSoft:]
>>> + 1106
>>>>>>> (UIFoundation + 390033) [0x7fff61a11391]
>>>>>>>
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 815 (UIFoundation + 396679) [0x7fff61a12d87]
>>>>>>>
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 241 (UIFoundation + 397071) [0x7fff61a12f0f]
>>>>>>>
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _layoutGlyphsInLayoutManager:startingAtGlyphIndex:maxNumberOfLineFragments:maxCharacterIndex:nextGlyphIndex:nextCharacterIndex:]
>>>>>>>
>>>>>>> + 3120 (UIFoundation + 94425) [0x7fff619c90d9]
>>>>>>>
>>>>>>> 51 -[NSATSTypesetter
>>>>>>> layoutParagraphAtPoint:] + 181 (UIFoundation + 399167)
>>> [0x7fff61a1373f]
>>>>>>>
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>>>>
>>> _layoutLineFragmentStartingWithGlyphAtIndex:characterIndex:atPoint:renderingContext:]
>>>>>>>
>>>>>>> + 6960 (UIFoundation + 285726) [0x7fff619f7c1e]
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSLayoutManager(NSPrivate)
>>>>>>> setLineFragmentRect:forGlyphRange:usedRect:baselineOffset:] + 85
>>>>>>> (UIFoundation + 413988) [0x7fff61a17124]
>>>>>>>
>>>>>>> 51 -[NSLayoutManager
>>>>>>> setLineFragmentRect:forGlyphRange:usedRect:] + 328 (UIFoundation +
>>>>>>> 414361) [0x7fff61a17299]
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSLayoutManager(NSPrivate)
>>>>>>> _updateUsageForTextContainer:addingUsedRect:] + 529
>>> (UIFoundation +
>>>>>>> 123653) [0x7fff619d0305]
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSLayoutManager(NSPrivate) _resizeTextViewForTextContainer:]
>>> + 1103
>>>>>>> (UIFoundation + 144184) [0x7fff619d5338]
>>>>>>>
>>>>>>> 51 -[NSTextView
>>>>>>> setConstrainedFrameSize:] + 591 (AppKit + 1539771)
>>> [0x7fff2dd61ebb]
>>>>>>>
>>>>>>> 51 -[NSTextView
>>>>>>> setFrameSize:] + 145 (AppKit + 2123877) [0x7fff2ddf0865]
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSTextView(NSPrivate) _setFrameSize:forceScroll:] + 962
>>> (AppKit +
>>>>>>> 2125105) [0x7fff2ddf0d31]
>>>>>>>
>>>>>>> 51 -[NSView
>>>>>>> setFrameSize:] + 3248 (AppKit + 503412) [0x7fff2dc64e74]
>>>>>>>
>>>>>>> 51 -[NSView
>>>>>>> _postFrameChangeNotification] + 82 (AppKit + 532785)
>>> [0x7fff2dc6c131]
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSClipView _reflectDocumentViewFrameChange] + 634 (AppKit +
>>> 812362)
>>>>>>> [0x7fff2dcb054a]
>>>>>>>
>>>>>>> 51
>>>>>>> __45-[NSClipView _reflectDocumentViewFrameChange]_block_invoke
>>> + 95
>>>>>>> (AppKit + 812882) [0x7fff2dcb0752]
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSScrollView reflectScrolledClipView:] + 774 (AppKit + 876231)
>>>>>>> [0x7fff2dcbfec7]
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSScrollView _tileWithoutRecursing] + 35 (AppKit + 939709)
>>>>>>> [0x7fff2dccf6bd]
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSScrollView tile] + 680 (AppKit + 940418) [0x7fff2dccf982]
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSScrollView _setContentViewFrame:] + 328 (AppKit + 953695)
>>>>>>> [0x7fff2dcd2d5f]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSView setFrame:] + 423 (AppKit + 575534) [0x7fff2dc7682e]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSClipView setFrameSize:] + 425 (AppKit + 810307)
>>> [0x7fff2dcafd43]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSView setFrameSize:] + 2045 (AppKit + 502209)
>>> [0x7fff2dc649c1]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSView resizeSubviewsWithOldSize:] + 525 (AppKit +
>>> 652445)
>>>>>>> [0x7fff2dc8949d]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSView resizeWithOldSuperviewSize:] + 1178 (AppKit +
>>>>>>> 654713) [0x7fff2dc89d79]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSView setFrame:] + 423 (AppKit + 575534)
>>> [0x7fff2dc7682e]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSTextView setFrameSize:] + 145 (AppKit + 2123877)
>>>>>>> [0x7fff2ddf0865]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSTextView(NSPrivate)
>>> _setFrameSize:forceScroll:] +
>>>>>>> 1130 (AppKit + 2125273) [0x7fff2ddf0dd9]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSLayoutManager
>>>>>>> boundingRectForGlyphRange:inTextContainer:] + 47 (UIFoundation
>>> + 451356)
>>>>>>> [0x7fff61a2031c]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>> _boundingRectForGlyphRange:inTextContainer:fast:fullLineRectsOnly:] +
>>>>>>> 108 (UIFoundation + 432612) [0x7fff61a1b9e4]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>>>>
>>> _rectArrayForRange:withinSelectionRange:rangeIsCharRange:singleRectOnly:fullLineRectsOnly:inTextContainer:rectCount:rangeWithinContainer:glyphsDrawOutsideLines:]
>>>>>>>
>>>>>>> + 58 (UIFoundation + 1820289) [0x7fff61b6e681]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>>
>>>>>
>>> _rectArrayForRange:withinSelectionRange:rangeIsCharRange:singleRectOnly:fullLineRectsOnly:inTextContainer:rectCount:rangeWithinContainer:glyphsDrawOutsideLines:rectArray:rectArrayCapacity:]
>>>>>>>
>>>>>>> + 748 (UIFoundation + 192486) [0x7fff619e0fe6]
>>>>>>>
>>>>>>>
>>>>>>> 51 _NSFastFillAllLayoutHolesForGlyphRange + 1596
>>>>>>> (UIFoundation + 202597) [0x7fff619e3765]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>> _fillLayoutHoleForCharacterRange:desiredNumberOfLines:isSoft:]
>>> + 1106
>>>>>>> (UIFoundation + 390033) [0x7fff61a11391]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 283 (UIFoundation + 396147) [0x7fff61a12b73]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 815 (UIFoundation + 396679) [0x7fff61a12d87]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 241 (UIFoundation + 397071) [0x7fff61a12f0f]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _layoutGlyphsInLayoutManager:startingAtGlyphIndex:maxNumberOfLineFragments:maxCharacterIndex:nextGlyphIndex:nextCharacterIndex:]
>>>>>>>
>>>>>>> + 2950 (UIFoundation + 94255) [0x7fff619c902f]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _getRemainingNominalParagraphRange:andParagraphSeparatorRange:charactarIndex:layoutManager:string:]
>>>>>>>
>>>>>>> + 1233 (UIFoundation + 398399) [0x7fff61a1343f]
>>>>>>>
>>>>>>>
>>>>>>> 51 ??? [0]
>>>>>>>
>>>>>>>
>>>>>>> 51 _sigtramp + 29
>>>>>>> (libsystem_platform.dylib + 13821) [0x7fff6abaa5fd]
>>>>>>>
>>>>>>>
>>>>>>> 51 sigactionSegv + 675
>>>>>>> (main.c:623,9 in libR.dylib + 1115667) [0x105e89613]
>>>>>>>
>>>>>>>
>>>>>>> 51 Re_ReadConsole +
>>> 184 (R +
>>>>>>> 64824) [0x105c74d38]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[RController
>>>>>>> handleReadConsole:] + 158 (R + 27070) [0x105c6b9be]
>>>>>>>
>>>>>>>
>>>>>>> 51 -[RController
>>>>>>> doProcessEvents:] + 190 (R + 50030) [0x105c7136e]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> -[NSApplication(NSEvent)
>>>>>>> _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
>>> (AppKit +
>>>>>>> 262256) [0x7fff2dc2a070]
>>>>>>>
>>>>>>>
>>>>>>> 51 _DPSNextEvent +
>>>>>>> 883 (AppKit + 268329) [0x7fff2dc2b829]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> _BlockUntilNextEventMatchingListInModeWithFilter + 64 (HIToolbox +
>>>>>>> 193913) [0x7fff2f5e3579]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> ReceiveNextEventCommon + 584 (HIToolbox + 194517) [0x7fff2f5e37d5]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> RunCurrentEventLoopInMode + 292 (HIToolbox + 195261)
>>> [0x7fff2f5e3abd]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> CFRunLoopRunSpecific + 462 (CoreFoundation + 532174)
>>> [0x7fff309b4ece]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> __CFRunLoopRun + 1871 (CoreFoundation + 535674) [0x7fff309b5c7a]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> __CFRunLoopDoTimers + 322 (CoreFoundation + 646871)
>>> [0x7fff309d0ed7]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> __CFRunLoopDoTimer + 859 (CoreFoundation + 648175)
>>> [0x7fff309d13ef]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> __CFRUNLOOP_IS_CALLING_OUT_TO_A_TIMER_CALLBACK_FUNCTION__ + 20
>>>>>>> (CoreFoundation + 649353) [0x7fff309d1889]
>>>>>>>
>>>>>>>
>>>>>>> 51
>>>>>>> __NSFireDelayedPerform + 415 (Foundation + 636642)
>>> [0x7fff330886e2]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 51 _NSFastFillAllLayoutHolesForGlyphRange + 1596 (UIFoundation +
>>>>>>> 202597) [0x7fff619e3765]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSLayoutManager(NSPrivate)
>>>>>>> _fillLayoutHoleForCharacterRange:desiredNumberOfLines:isSoft:]
>>> + 1106
>>>>>>> (UIFoundation + 390033) [0x7fff61a11391]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 283 (UIFoundation + 396147) [0x7fff61a12b73]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSATSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 815 (UIFoundation + 396679) [0x7fff61a12d87]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>> layoutCharactersInRange:forLayoutManager:maximumNumberOfLineFragments:]
>>>>>>> + 241 (UIFoundation + 397071) [0x7fff61a12f0f]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _layoutGlyphsInLayoutManager:startingAtGlyphIndex:maxNumberOfLineFragments:maxCharacterIndex:nextGlyphIndex:nextCharacterIndex:]
>>>>>>>
>>>>>>> + 2950 (UIFoundation + 94255) [0x7fff619c902f]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 51 -[NSTypesetter
>>>>>>>
>>>>>
>>> _getRemainingNominalParagraphRange:andParagraphSeparatorRange:charactarIndex:layoutManager:string:]
>>>>>>>
>>>>>>> + 1233 (UIFoundation + 398399) [0x7fff61a1343f]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 51 ??? [0]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 13 <Frontmost App>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 9 <User mode>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> 3 <Frontmost App, User mode>
>>>>>>>
>>>>>>> Binary Images:
>>>>>>> 0x105c65000 - 0x105cecfff org.R-project.R R
>>> 4.0.0
>>>>>>> GUI 1.71 Catalina build (7827)
>>> <1C907587-5382-3CF9-B969-656D72C6C435>
>>>>>>> /Applications/R.app/Contents/MacOS/R
>>>>>>> 0x105d79000 - 0x106080fff libR.dylib
>>>>>>> <68A05988-8D8E-3034-95BE-E99CDAD41083>
>>>>>>>
>>> /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib
>>>>>>> 0x7fff2dbea000 - 0x7fff2e9aafff com.apple.AppKit 6.9
>>>>>>> (1894.50.103) <61269B8C-C432-335F-8894-B95C235A41A5>
>>>>>>> /System/Library/Frameworks/AppKit.framework/Versions/C/AppKit
>>>>>>> 0x7fff2f5b4000 - 0x7fff2f8a8fff com.apple.HIToolbox 2.1.1
>>>>>>> (994.6) <5C44ACA7-D158-3F9B-8F88-0477510D44FA>
>>>>>>>
>>>>>>>
>>>>>
>>> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox
>>>>>>> 0x7fff30933000 - 0x7fff30db2fff com.apple.CoreFoundation
>>>>>>> 6.9 (1676.105) <6AF8B3CC-BC3F-3869-B9FB-1D881422364E>
>>>>>>>
>>>>>>>
>>>>>
>>> /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
>>>>>>> 0x7fff32fed000 - 0x7fff333b2fff com.apple.Foundation 6.9
>>>>>>> (1676.105) <1FA28BAB-7296-3A09-8E1E-E62A7D233DB8>
>>>>>>>
>>> /System/Library/Frameworks/Foundation.framework/Versions/C/Foundation
>>>>>>> 0x7fff3c478000 - 0x7fff3c6fafff com.apple.QuartzCore 1.11
>>>>>>> (841.2) <444E6F22-DFA6-391B-B51F-A96AE69E524D>
>>>>>>>
>>> /System/Library/Frameworks/QuartzCore.framework/Versions/A/QuartzCore
>>>>>>> 0x7fff619b2000 - 0x7fff61c0afff com.apple.UIFoundation 1.0
>>>>>>> (662) <DFD3DD4A-E661-3A12-BB02-06898949617D>
>>>>>>>
>>>>>>>
>>>>>
>>> /System/Library/PrivateFrameworks/UIFoundation.framework/Versions/A/UIFoundation
>>>>>>> 0x7fff6a997000 - 0x7fff6a9cdfff libdyld.dylib (750.5)
>>>>>>> <7E711A46-5E4D-393C-AEA6-440E2A5CCD0C>
>>>>>>> /usr/lib/system/libdyld.dylib
>>>>>>> 0x7fff6aba7000 - 0x7fff6abaffff libsystem_platform.dylib
>>>>>>> (220.100.1) <736920EA-6AE0-3B1B-BBDA-7DCDF0C229DF>
>>>>>>> /usr/lib/system/libsystem_platform.dylib
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> On 6/7/20 5:51 PM, Bob Rudis wrote:
>>>>>>>> Are there any entries in Console.app that might help triage?
>>>>>>>>
>>>>>>>> Have you tried creating a new user on your Mac and seeing if that
>>>>>>> account has issues performing the same tasks your user account is
>>>>> having?
>>>>>>>>
>>>>>>>> Having said that, I just grabbed "Mac OS X GUI rev. 7843 for
>>> R 4.0.x"
>>>>>>> from mac.r-project.org <http://mac.r-project.org> (I never use
>>> R.app nor do I keep it installed
>>>>>>> unless testing something) and am running R 4.0.1 on latest
>>> Catalina
>>>>> beta —
>>>>>>> 10.15.6 Beta (19G36e) — and it crashes every time I try to
>>> open a .R
>>>>> file
>>>>>>> (crashlog
>>>>>>>
>>> https://paste.sr.ht/~hrbrmstr/9899f3a7f3c1724cc952b935c3fc39a47cac88ac)
>>>>>>>>
>>>>>>>>> On Jun 7, 2020, at 16:22, Carl Witthoft <carl using witthoft.com
>>> <mailto:carl using witthoft.com>> wrote:
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> Hi,
>>>>>>>>> 2 weeks ago I installed R 4.0 on my new Catalina machine. Things
>>>>> seemed
>>>>>>> to be working fine.
>>>>>>>>> Today I installed R 4.01, and now I can't open any FILE.r -
>>> no matter
>>>>>>> what way I try, i.e. double-click the file, drag/drop, or open
>>> from the
>>>>> R
>>>>>>> GUI menu, R hangs with the beachball.
>>>>>>>>> I tried giving R full disk access and other privileges via
>>> Security
>>>>>>> settings; no help.
>>>>>>>>>
>>>>>>>>> So I deleted R 4.01 and reinstalled R 4.0, and dang if I no
>>> longer can
>>>>>>> open files any more! I've tried all the suggestions in the
>>> previous
>>>>> thread
>>>>>>> in this mailing group; no help.
>>>>>>>>>
>>>>>>>>> What else can I do, or delete, or uninstall, to at least get
>>> back to
>>>>>>> where I was? Right now I'm basically DIW.
>>>>>>>>> --
>>>>>>>>> Carl Witthoft
>>>>>>>>> carl using witthoft.com <mailto:carl using witthoft.com>
>>>>>>>>> resume: https://app.box.com/file/498153801347
>>>>>>>>>
>>>>>>>>> _______________________________________________
>>>>>>>>> R-SIG-Mac mailing list
>>>>>>>>> R-SIG-Mac using r-project.org <mailto:R-SIG-Mac using r-project.org>
>>>>>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>>>>>>>
>>>>>>>
>>>>>>> --
>>>>>>> Carl Witthoft
>>>>>>> carl using witthoft.com <mailto:carl using witthoft.com>
>>>>>>> resume: https://app.box.com/file/498153801347
>>>>>>>
>>>>>>> _______________________________________________
>>>>>>> R-SIG-Mac mailing list
>>>>>>> R-SIG-Mac using r-project.org <mailto:R-SIG-Mac using r-project.org>
>>>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>>>>>>
>>>>>>
>>>>>> [[alternative HTML version deleted]]
>>>>>>
>>>>>> _______________________________________________
>>>>>> R-SIG-Mac mailing list
>>>>>> R-SIG-Mac using r-project.org <mailto:R-SIG-Mac using r-project.org>
>>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>>>>>
>>>>>
>>>>>
>>>>
>>>> [[alternative HTML version deleted]]
>>>>
>>>> _______________________________________________
>>>> R-SIG-Mac mailing list
>>>> R-SIG-Mac using r-project.org <mailto:R-SIG-Mac using r-project.org>
>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>>>
>>
>> --
>> Carl Witthoft
>> carl using witthoft.com
>> resume: https://app.box.com/file/498153801347
>>
>> _______________________________________________
>> R-SIG-Mac mailing list
>> R-SIG-Mac using r-project.org
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>
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