[R-SIG-Mac] Installing R on 10.14 (Mojave)

[Tim Bates]

fyi

home$ sudo installer -pkg \
> /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg \
> -target /
Password:
installer: Error - the package path specified was invalid: '/Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg'.
spearman:OpenMx tim$ 


> On 25 Sep 2018, at 1:04 pm, Marc Schwartz via R-SIG-Mac <r-sig-mac using r-project.org> wrote:
> 
> Thanks to both of you for the pointers on this.
> 
> I have not used a dark theme since my Fedora days. Still getting used to it... :-)
> 
> Regards,
> 
> Marc Schwartz
> 
> 
>> On Sep 25, 2018, at 5:55 AM, peter dalgaard <pdalgd using gmail.com> wrote:
>> 
>> [Oops. Forgot to copy this back to R-sig-mac, it seems...]
>> 
>> Thanks, Brian,
>> 
>> Yes, we have previously learned the hard way that timing R releases too close to MacOS updates is a bad idea...
>> 
>> The manual updates haven't made it to CRAN yet, you need to look in the sources. 
>> 
>> For those who might be curious, but lazy:
>> 
>>>>>> 
>> As from macOS 10.14 (‘Mojave’) an additional step is needed to install the headers to /usr/include: from a Terminal run
>> 
>> sudo installer -pkg \
>> /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg \
>> -target /
>> 
>> Alternatively, change the include path via
>> 
>> CPPFLAGS="-isystem /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include"
>> <<<<
>> 
>> 
>> Incidentally, probably unrelated, I discovered that the R-patched snapshots had stalled since Sep 13 due to an SVN database error. This should be cleared up now.
>> 
>> -pd 
>> 
>>> On 25 Sep 2018, at 08:59 , Prof Brian Ripley <ripley using stats.ox.ac.uk> wrote:
>>> 
>>> A heads up:
>>> 
>>> The Mojave update removes /usr/include and (re)installing the Command Line Tools does not put the standard system headers there.  Workarounds are now described in the R-admin manual for R-devel and R-patched.
>>> 
>>> -- 
>>> Brian D. Ripley,                  ripley using stats.ox.ac.uk
>>> Emeritus Professor of Applied Statistics, University of Oxford
>>> 
>>> _______________________________________________
>>> R-SIG-Mac mailing list
>>> R-SIG-Mac using r-project.org
>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>> 
>> -- 
>> Peter Dalgaard, Professor,
>> Center for Statistics, Copenhagen Business School
>> Solbjerg Plads 3, 2000 Frederiksberg, Denmark
>> Phone: (+45)38153501
>> Office: A 4.23
>> Email: pd.mes using cbs.dk  Priv: PDalgd using gmail.com
>> 
>> _______________________________________________
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>> R-SIG-Mac using r-project.org
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> 
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