[R-SIG-Mac] R 3.5.0

[David Winsemius]

It was my experience yesterday with using the old method (copy folders to new ../library/ and use update.packages(checkBuilt=TRUE) ) that I was given the option to have packages with more recent updates compiled from source. I had anticipated the issue (time) mentioned by Simon, so I only copied over perhaps a third of my full complement of packages. 

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> On Apr 25, 2018, at 11:20 AM, Roy Mendelssohn - NOAA Federal <roy.mendelssohn at noaa.gov> wrote:
> 
> Hi Simon:
> 
> Perfect,  thank you for the info.  One of the reasons I was asking is in ~/Library/R i have a umber of packages that in fact are in CRAN but what I have are the development versions.  Everything I have in /Library/Frameworks/R are the CRAN versions.  It is easier for me to do the ~/Library//R update myself through a script so I keep the development versions.
> 
> Mostly also thanks for all of your work on the Mac version.  Much appreciated.
> 
> -Roy
> 
>> On Apr 25, 2018, at 11:10 AM, Simon Urbanek <simon.urbanek at R-project.org> wrote:
>> 
>> Roy,
>> 
>> first, I'd recommend holding off with updating packages. Due to the number of packages, updating all of them takes quite some time, so in order to use the binaries that are built with the release version of R it will probably take at least until tomorrow that they are propagated through the mirror network. Hence you'll have to re-install them anyway if you do it now. 
>> 
>> That said, the "select packages from previous version" search function only applies to the system library - the use library is not in scope. However, where you install those packages is up to you depending on the selection in the Package Installer - the two steps are separate in the GUI.
>> 
>> Cheers,
>> Simon
>> 
>> 
>> 
>>> On Apr 25, 2018, at 11:26 AM, Roy Mendelssohn - NOAA Federal <roy.mendelssohn at noaa.gov> wrote:
>>> 
>>> Hi All:
>>> 
>>> If I remember correctly how R release numbers work,  R 3.5.0 would mean best practice would be to re-install all packages,  is this correct?  The Mac version has had a mechanism that does helps automate this process,  but I have a few questions as to how this works.  Specifically:
>>> 
>>> 1.  In looking for packages to re-install, does it look just in the /LIbrary/Frameworks/R location for packages,  or does it look in ~/username/Library/R also?
>>> 
>>> 2.  If it does look at both locations,  does the re-install then put everything into  /LIbrary/Frameworks/R or is present location maintained?
>>> 
>>> I ask because I have a lot of packages in ~/username/Library/R and want to maintain things that way, so I want to be certain that I know what will happen fi I use the built-in mechanism.
>>> 
>>> Thanks,
>>> 
>>> -Roy
>>> 
>>> 
>>> 
>>> **********************
>>> "The contents of this message do not reflect any position of the U.S. Government or NOAA."
>>> **********************
>>> Roy Mendelssohn
>>> Supervisory Operations Research Analyst
>>> NOAA/NMFS
>>> Environmental Research Division
>>> Southwest Fisheries Science Center
>>> ***Note new street address***
>>> 110 McAllister Way
>>> Santa Cruz, CA 95060
>>> Phone: (831)-420-3666
>>> Fax: (831) 420-3980
>>> e-mail: Roy.Mendelssohn at noaa.gov www: http://www.pfeg.noaa.gov/
>>> 
>>> "Old age and treachery will overcome youth and skill."
>>> "From those who have been given much, much will be expected" 
>>> "the arc of the moral universe is long, but it bends toward justice" -MLK Jr.
>>> 
>>> _______________________________________________
>>> R-SIG-Mac mailing list
>>> R-SIG-Mac at r-project.org
>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>> 
>> 
> 
> **********************
> "The contents of this message do not reflect any position of the U.S. Government or NOAA."
> **********************
> Roy Mendelssohn
> Supervisory Operations Research Analyst
> NOAA/NMFS
> Environmental Research Division
> Southwest Fisheries Science Center
> ***Note new street address***
> 110 McAllister Way
> Santa Cruz, CA 95060
> Phone: (831)-420-3666
> Fax: (831) 420-3980
> e-mail: Roy.Mendelssohn at noaa.gov www: http://www.pfeg.noaa.gov/
> 
> "Old age and treachery will overcome youth and skill."
> "From those who have been given much, much will be expected" 
> "the arc of the moral universe is long, but it bends toward justice" -MLK Jr.
> 
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