[R-SIG-Mac] Updating some packages fails
simon.urbanek at R-project.org
Thu Jan 11 19:17:43 CET 2018
the archiving on CRAN has changed recently which broke the updates so recently the update for macOS packages have been suspended. Hence some most recent binaries is not available yet - it should be up by tomorrow.
> On Jan 11, 2018, at 12:26 PM, Manuel Spínola <mspinola10 at gmail.com> wrote:
> Dear list members,
> When trying updating some packages in MacOS High Sierra 10.13 (R 3.4.2)
> some packages, as "sf", fails:
> There is a binary version available but the source version is later:
> binary source needs_compilation
> sf 0.5-5 0.6-0 TRUE
> Do you want to install from sources the package which needs compilation?
> y/n: y
> installing the source package ‘sf’
> trying URL 'https://cran.rstudio.com/src/contrib/sf_0.6-0.tar.gz'
> Content type 'application/x-gzip' length 7399611 bytes (7.1 MB)
> downloaded 7.1 MB
> Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) :
> unknown timezone 'default/America/Costa_Rica'
> * installing *source* package ‘sf’ ...
> ** package ‘sf’ successfully unpacked and MD5 sums checked
> configure: CC: clang
> configure: CXX: clang++
> checking for gdal-config... no
> configure: error: gdal-config not found or not executable.
> ERROR: configuration failed for package ‘sf’
> * removing
> * restoring previous
> Warning in install.packages :
> installation of package ‘sf’ had non-zero exit status
> The downloaded source packages are in
> Any solution to this problem?
> *Manuel Spínola, Ph.D.*
> Instituto Internacional en Conservación y Manejo de Vida Silvestre
> Universidad Nacional
> Apartado 1350-3000
> COSTA RICA
> mspinola at una.cr <mspinola at una.ac.cr>
> mspinola10 at gmail.com
> Teléfono: (506) 8706 - 4662
> Personal website: Lobito de río <https://sites.google.com/site/lobitoderio/>
> Institutional website: ICOMVIS <http://www.icomvis.una.ac.cr/>
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