[R-SIG-Mac] Update of RcppParallel failed

Kevin Ushey kevinushey at gmail.com
Wed Feb 14 15:58:43 CET 2018


RcppParallel is indeed a package produced and maintained by the Rcpp
core team, but RcppParallel is now considered ORPHANED on CRAN:

https://cran.r-project.org/package=RcppParallel

This is in spite of my repeated attempts to submit updates of this
package to CRAN (as the package maintainer); submissions which were
ignored and received no response from the CRAN team. This also
includes posts I made to the R-package-devel mailing list, where I
tried to ask what I needed to do to get RcppParallel back on CRAN.
Also ignored.

Professor Ripley and the CRAN team are currently the 'de facto'
maintainers of the version of RcppParallel you see on CRAN. I guess
you can ask them if you're having trouble installing the CRAN version,
until we've sorted out CRAN maintainership of the package.

Thanks,
Kevin

On Wed, Feb 14, 2018 at 6:46 AM, Keith O'Hara <keith.ohara at nyu.edu> wrote:
> (It’s under the RcppCore banner, so I figured it was Dirk and co.)
>
> The package installed fine for me (on a Mac), but the build doesn’t seem to import the CC and CXX settings from ~.R/Makevars or Makeconf for some reason. Bug on my end, or is there a reason for this?
>
>> On Feb 14, 2018, at 9:29 AM, Prof Brian Ripley <ripley at stats.ox.ac.uk> wrote:
>>
>> On 14/02/2018 14:01, Keith O'Hara wrote:
>>> This looks like an issue to bring up with the Rcpp guys, not R… but can you provide a full printout of the error? I’m guessing this failed when compiling a C file, not C++.
>>
>> RcppParalllel is not part of Rcpp, and orphaned.  It seems to be a mac-specific issue (it is not happening on other platforms with clang).
>>
>> There is a bug in src/Makevars.  The line
>>
>> PKG_CPPFLAGS += $(CXX1XSTD) -I../inst/include/
>>
>> should refer to PKG_CXXFLAGS.  I'll fix that after testing as version 4.3.20.2.
>>
>>
>>
>>
>>>> On Feb 14, 2018, at 8:43 AM, Marc Girondot via R-SIG-Mac <r-sig-mac at r-project.org> wrote:
>>>>
>>>> This morning I had an update to apply for RcppParallel but it failed
>>>>
>>>> Here are some information:
>>>>
>>>>> update.packages()
>>>> RcppParallel :
>>>>  Version 4.3.20 installed in /Library/Frameworks/R.framework/Versions/3.5/Resources/library
>>>>  Version 4.3.20.1 available at https://cran.r-project.org
>>>> ....
>>>> During instal, I had this error
>>>>
>>>> error: invalid argument '-std=gnu++11' not allowed with 'C'
>>>>
>>>> It failed with the two versions of clang that I have installed:
>>>>
>>>> clang++ --version
>>>> clang version 5.0.1 (tags/RELEASE_501/final)
>>>> Target: x86_64-apple-darwin17.4.0
>>>> Thread model: posix
>>>> InstalledDir: /usr/local/opt/llvm/bin
>>>>
>>>> or
>>>>
>>>> clang++ --version
>>>> Apple LLVM version 9.0.0 (clang-900.0.39.2)
>>>> Target: x86_64-apple-darwin17.4.0
>>>> Thread model: posix
>>>> InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
>>>>
>>>> Do you have some idea about what's happened and how to solve this problem ?
>>>>
>>>> Thanks
>>>>
>>>> Marc
>>>>
>>>> _________________
>>>>
>>>> Information on my R version:
>>>>
>>>>> R.Version()
>>>> $platform
>>>> [1] "x86_64-apple-darwin15.6.0"
>>>>
>>>> $arch
>>>> [1] "x86_64"
>>>>
>>>> $os
>>>> [1] "darwin15.6.0"
>>>>
>>>> $system
>>>> [1] "x86_64, darwin15.6.0"
>>>>
>>>> $status
>>>> [1] "Under development (unstable)"
>>>>
>>>> $major
>>>> [1] "3"
>>>>
>>>> $minor
>>>> [1] "5.0"
>>>>
>>>> $year
>>>> [1] "2018"
>>>>
>>>> $month
>>>> [1] "02"
>>>>
>>>> $day
>>>> [1] "13"
>>>>
>>>> $`svn rev`
>>>> [1] "74247"
>>>>
>>>> $language
>>>> [1] "R"
>>>>
>>>> $version.string
>>>> [1] "R Under development (unstable) (2018-02-13 r74247)"
>>>>
>>>> $nickname
>>>> [1] "Unsuffered Consequences"
>>>>
>>>> _______________________________________________
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>>
>>
>> --
>> Brian D. Ripley,                  ripley at stats.ox.ac.uk <mailto:ripley at stats.ox.ac.uk>
>> Emeritus Professor of Applied Statistics, University of Oxford
>>
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