[R-SIG-Mac] segfault on R v. 3.4.1

James Plante jimplante at me.com
Thu Sep 14 18:13:39 CEST 2017


If I knew what a segfault was, I might be able to be more helpful. 
Do any of you folks know what might’ve happened? I’ve d/l’d and installed the 3.4.1. Mac binary from CRAN three times, and each time I get the text below.
Any help will be appreciated; let me know if I can include anything else. A sysinfo() is out of the question, since my owly option is how I want to quit R. The only guess I have is that I don’t have enough memory installed. 
Main system info: 
MacOS Sierra v. 10.12.8; 27” iMac, late 2013; 3.4GHz Core i%; 8GB 1600MHz DDR3
Thanks in advance,
Jim
R version 3.4.1 (2017-06-30) -- "Single Candle"
Copyright (C) 2017 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin15.6.0 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
  Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
 *** caught segfault ***
address 0x1310, cause 'memory not mapped'
Traceback:
 1: dyn.load(file, DLLpath = DLLpath, ...)
 2: library.dynam(lib, package, package.lib)
 3: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
 4: asNamespace(ns)
 5: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,     .libPaths()), versionCheck = vI[[j]]),
i[[2L]], from = package)
 6: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
 7: asNamespace(ns)
 8: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc,
i[[2L]], from = package)
.libPaths()), versionCheck = vI[[j]]),
 9: loadNamespace(package, lib.loc)
10: doTryCatch(return(expr), name, parentenv, handler)
11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
12: tryCatchList(expr, classes, parentenv, handlers)
13: tryCatch({    attr(package, "LibPath") <- which.lib.loc
<- attachNamespace(ns, pos = pos, deps)}, error = function(e) {
paste(" in", deparse(cc)[1L])    else ""    msg <- gettextf("package or namespace load failed for %s%s:\n
%s",         sQuote(package), P, conditionMessage(e))    if (logical.return)
msg), domain = NA)    else stop(msg, call. = FALSE, domain = NA)})
14: library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,
warn.conflicts, quietly = quietly)
15: doTryCatch(return(expr), name, parentenv, handler)
16: tryCatchOne(expr, names, parentenv, handlers[[1L]])
17: tryCatchList(expr, classes, parentenv, handlers)
18: tryCatch(library(package, lib.loc = lib.loc, character.only = TRUE,     logical.return = TRUE,
warn.conflicts = warn.conflicts, quietly = quietly),     error = function(e) e)
19: require(pkg, quietly = TRUE, warn.conflicts = FALSE, character.only = TRUE)
20: .First.sys()
Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
2017-09-14 08:14:57.208 R[11081:2277811] IMKClient Stall detected, *please Report* your user scenario
attaching a spindump (or sysdiagnose) that captures the problem - (imkxpc_attributesForCharacterIndex:reply:)
block performed very slowly (1.16 secs).
Selection:
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