[R-SIG-Mac] making R.app and home-brew live happily together

[Federico Calboli]

On 5 Mar 2014, at 13:12, Prof Brian Ripley <ripley at stats.ox.ac.uk> wrote:

> On 05/03/2014 13:04, Federico Calboli wrote:
>> On 4 Mar 2014, at 18:41, Davor Cubranic <cubranic at stat.ubc.ca> wrote:
>> 
>>> If you don’t care about Tcl/Tk, you could also install R without it. Just choose “Customize” in the installer and unselect it.
>> 
>> isn’t there a different tcl/tk framework that one can use anyway?  I’m referring to the active state one (http://www.activestate.com/activetcl/downloads)
> 
> That Tcl/Tk is not a 'framework': there are frameworks you can use, but not with the CRAN distribution of R.  See the R-admin manual.

That’s it then — last time I used X11 on OSX was ~ 3 years ago (i.e. I am not a big tcl/tk user).  I reinstalled R 3.0.3 RC from http://r.research.att.com/, customised the installation omitting tcl/tk, removed the tcl/tk related stuff I had installed before and now both R and HB are happy.

BW

F




> 
> 
>> BW
>> 
>> F
>> 
>> 
>> 
>>> 
>>> Davor
>>> 
>>> On Feb 28, 2014, at 9:51 AM, Federico Calboli <f.calboli at imperial.ac.uk> wrote:
>>> 
>>>> Simon,
>>>> 
>>>> <snip>
>>>> 
>>>>> Unfortunately HB installs by default in /usr/local and requires full control so you cannot have native libraries and HB in the same place at the same time. So essentially you have to pick one or the other. There are two options:
>>>>> 
>>>>> a) install HB in another place. This allows you to keep native libraries in /usr/local and parallel HB. HB is less tested that way, though, so that's why HB is shy of recommending it.
>>>>> 
>>>>> b) ignore HB's moaning. It should be ok as long as you don't install tcl/tk via HB. It may get complicated if dependencies detect tcl/tk so for safety you could rename the .pc files and the t*Config.sh files if you don't expect to compile R packages that depend on tcl/tk.
>>>> 
>>>> I am ignoring the moanings of brew doctor.  I generally try and avoid compiling R packages if at all possible, and I never used stuff that uses tcl/tk (that I know of).  My main concern is that I want to install SciPy and Python 3 (assuming this can be done in a way that will not get Mavericks throw a fit) and that might — or not — get some tcl/tk action in.  If not, R.app and HB can live together for all I care.
>>>> 
>>>> Best
>>>> 
>>>> F
>>>> 
>>>> 
>>>> 
>>>> 
>>>>> 
>>>>> Cheers,
>>>>> Simon
>>>>> 
>>>>> 
>>>>>> BW
>>>>>> 
>>>>>> F
>>>>>> 
>>>>>> 
>>>>>> PS  I also asked on apple stack, but I haven’t go any reasonable answer thus far and I’d rather get going.
>>>>>> 
>>>>>> 
>>>>>> 
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>>>> 
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>> 
>> 
>> 
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> 
> 
> -- 
> Brian D. Ripley,                  ripley at stats.ox.ac.uk
> Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
> University of Oxford,             Tel:  +44 1865 272861 (self)
> 1 South Parks Road,                     +44 1865 272866 (PA)
> Oxford OX1 3TG, UK                Fax:  +44 1865 272595

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