[R-SIG-Mac] Error installing the package packfor in Yosemite Max OS

[Rafael Guariento]

am having problems installing the Package packfor form source in Mac OS X
Yosemite in the R software. I know that the package depends on fortran
compiler, so I installed the gfortran available in CRAN but it does not
affect anything. Bellow I am reproducing the error log.

please if anyone has any advice on this would be much appreciated.

Thanks in advance


> install.packages("~/Downloads/packfor_0.0-8.tar", repos =
NULL,type="source")

* installing *source* package ‘packfor’ ...

** libs

clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG
 -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include
 -fPIC  -Wall -mtune=core2 -g -O2  -c forward.c -o forward.o

forward.c:411:3: warning: implicit declaration of function 'dgesvd_' is
invalid in C99 [-Wimplicit-function-declaration]

  F77_CALL(dgesvd)(&jobu, &jobvt,&size, &size,A, &size,
D,U,&size,V,&size,&work1, &lwork,&error);

  ^

/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:82:22: note:
expanded from macro 'F77_CALL'

# define F77_CALL(x)    x ## _

                        ^

<scratch space>:8:1: note: expanded from here

dgesvd_

^

forward.c:421:43: warning: data argument not used by format string
[-Wformat-extra-args]

      fprintf(stderr, "error in dinvG: ", error);

                      ~~~~~~~~~~~~~~~~~~  ^

/Library/Frameworks/R.framework/Resources/include/R_ext/Error.h:51:15:
note: expanded from macro 'error'

#define error Rf_error

              ^

2 warnings generated.

clang -dynamiclib -Wl,-headerpad_max_install_names -undefined
dynamic_lookup -single_module -multiply_defined suppress
-L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o
packfor.so forward.o -L/Library/Frameworks/R.framework/Resources/lib
-lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas
-L/usr/local/lib/gcc/x86_64-apple-darwin13.0.0/4.8.2 -lgfortran -lquadmath
-lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework
-Wl,CoreFoundation

Warning message:

In install.packages("~/Downloads/packfor_0.0-8.tar", repos = NULL,  :

  installation of package ‘/Users/rafael/Downloads/packfor_0.0-8.tar’ had
non-zero exit status

ld: warning: directory not found for option
'-L/usr/local/lib/gcc/x86_64-apple-darwin13.0.0/4.8.2'

ld: library not found for -lquadmath

clang: error: linker command failed with exit code 1 (use -v to see
invocation)

make: *** [packfor.so] Error 1

ERROR: compilation failed for package ‘packfor’

* removing
‘/Library/Frameworks/R.framework/Versions/3.1/Resources/library/packfor’

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