[R-SIG-Mac] R crashes with OSX 10.9 ?

[Vincent Philion]

Hi!

Sorry for the multiple emails: I think this can help knowledgeable people solve this issue:

If I use Rstudio on the same computer, all is good.

> 1+1
[1] 2
> ()
Error: unexpected ‘)' in "()"

My conclusion: it’s really R 3.0.1 GUI 1.61 Snow Leopard build (6492) that is not happy with 10.9 (developer version #2)

Take home lesson: I should stay away of development software when I have work to do!

;-)

Vincent


On 26juin, 2013, at 12:47 PM, Vincent Philion <vincent.philion at irda.qc.ca> wrote:

> Hello again, to further document = if I select to “abort”, the following report is sent to Apple (portion of report)
> 
> Process:         R [2150]
> Path:            /Applications/R.app/Contents/MacOS/R
> Identifier:      org.R-project.R
> Version:         R 3.0.1 GUI 1.61 Snow Leopard build (6492)
> Code Type:       X86-64 (Native)
> Parent Process:  launchd [252]
> Responsible:     R [2150]
> User ID:         503
> 
> Date/Time:       2013-06-26 12:44:57.496 -0400
> OS Version:      Mac OS X 10.9 (13A497d)
> Report Version:  11
> Anonymous UUID:  FDE00247-F8B3-25C1-B799-942C4823E9B2
> 
> Sleep/Wake UUID: 190054C0-34B5-4355-B717-91749ECB2FDE
> 
> Crashed Thread:  1
> 
> Exception Type:  EXC_CRASH (SIGSEGV)
> Exception Codes: 0x0000000000000000, 0x0000000000000000
> 
> Thread 0:: Dispatch queue: com.apple.main-thread
> 0   libsystem_c.dylib             	0x00007fff84f378f2 strlen + 18
> 1   libobjc.A.dylib               	0x00007fff8d89612d objc_opt::objc_stringhash_t::getIndex(char const*) const + 25
> 
> Thread 1 Crashed:
> 0   libsystem_kernel.dylib        	0x00007fff85bbde9a __workq_kernreturn + 10
> 1   libsystem_pthread.dylib       	0x00007fff8c384f4e _pthread_wqthread + 324
> 2   libsystem_pthread.dylib       	0x00007fff8c387fd9 start_wqthread + 13
> 
> 
> 
> 
> 
> 
> On 26juin, 2013, at 12:42 PM, Vincent Philion <vincent.philion at irda.qc.ca> wrote:
> 
>> Hi! I had a working R installation before I got carried away and installed the OSX “Maverick” developer preview.
>> 
>> Now, any error in R results in a crash.
>> 
>> ex:
>> 
>>> 1+1
>> [1] 2
>> 
>>> ()
>> Error: unexpected ')' in "()"
>> 
>> *** caught segfault ***
>> address 0x7c0, cause 'memory not mapped'
>> 
>> Possible actions:
>> 1: abort (with core dump, if enabled)
>> 2: normal R exit
>> 3: exit R without saving workspace
>> 4: exit R saving workspace
>> Selection:
>> 
>> Help?
>> 
>> 
>> Vincent Philion, agr., M.Sc.
>> Microbiologiste/Phytopathologiste (pomiculture)
>> 
>> Institut de recherche et de développement en agro-environnement
>> Research and Development Institute for the Agri-Environment
>> 
>> www.irda.qc.ca<http://www.irda.qc.ca>
>> 
>> Centre de recherche
>> 335, chemin des Vingt-Cinq Est
>> Saint-Bruno-de-Montarville (Québec)  J3V 0G7
>> 
>> vincent.philion at irda.qc.ca<mailto:vincent.philion at irda.qc.ca>
>> 
>> Bureau: 450 653-7368 #350
>> Cellulaire: 514-623-8275
>> Skype: VENTURIA
>> Télécopie: 450 653-1927
>> 
>> Verger expérimental
>> 330, Rang des vingt-cinq Est
>> Saint-Bruno-de-Montarville (Québec)  J3V 4P6
>> Téléphone et télécopieur : 450 653-8375
>> 
>> Pour nous trouver, cliquer sur le lien:
>> Laboratoire<http://maps.google.ca/maps/place?cid=9609486867104665866&q=irda+pfi&hl=fr&sll=45.557814,-73.360476&sspn=8.87586,1.961403&ie=UTF8&ll=45.557814,-73.360476&spn=0,0&z=16>
>> Verger<http://maps.google.ca/maps/place?cid=11405391288824931904&q=verger+irda&hl=fr&sll=45.54961,-73.350585&sspn=0.012504,0.018389&ie=UTF8&ll=45.54961,-73.350585&spn=0,0&z=16>
>> 
>> 
>> 
>> 
>> 	[[alternative HTML version deleted]]
>> 
>> _______________________________________________
>> R-SIG-Mac mailing list
>> R-SIG-Mac at r-project.org
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
> 
> Vincent Philion, agr., M.Sc.
> Microbiologiste/Phytopathologiste (pomiculture)
> 
> Institut de recherche et de développement en agro-environnement
> Research and Development Institute for the Agri-Environment
> 
> www.irda.qc.ca
> 
> Centre de recherche
> 335, chemin des Vingt-Cinq Est
> Saint-Bruno-de-Montarville (Québec)  J3V 0G7
> 
> vincent.philion at irda.qc.ca
> 
> Bureau: 450 653-7368 #350
> Cellulaire: 514-623-8275
> Skype: VENTURIA
> Télécopie: 450 653-1927 
> 
> Verger expérimental
> 330, Rang des vingt-cinq Est
> Saint-Bruno-de-Montarville (Québec)  J3V 4P6
> Téléphone et télécopieur : 450 653-8375
> 
> Pour nous trouver, cliquer sur le lien:
> Laboratoire
> Verger
> 
> _______________________________________________
> R-SIG-Mac mailing list
> R-SIG-Mac at r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac

Vincent Philion, agr., M.Sc.
Microbiologiste/Phytopathologiste (pomiculture)

Institut de recherche et de développement en agro-environnement
Research and Development Institute for the Agri-Environment

www.irda.qc.ca

Centre de recherche
335, chemin des Vingt-Cinq Est
Saint-Bruno-de-Montarville (Québec)  J3V 0G7

vincent.philion at irda.qc.ca

Bureau: 450 653-7368 #350
Cellulaire: 514-623-8275
Skype: VENTURIA
Télécopie: 450 653-1927 

Verger expérimental
330, Rang des vingt-cinq Est
Saint-Bruno-de-Montarville (Québec)  J3V 4P6
Téléphone et télécopieur : 450 653-8375

Pour nous trouver, cliquer sur le lien:
Laboratoire
Verger