[R-SIG-Mac] R.app doesn't respect DYLD_FALLBACK_LIBRARY_PATH
Tom Schoenemann
toms at indiana.edu
Thu Aug 8 22:42:22 CEST 2013
Hello,
I am trying to get a custom R package (from another group) to run on my system. If I call it from the command line r, it works fine. If I call it from R.app, it complains with:
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/ANTsR/libs/libRantsRegistration.so':
dlopen(/Library/Frameworks/R.framework/Versions/3.0/Resources/library/ANTsR/libs/libRantsRegistration.so, 6): Library not loaded: libitkdouble-conversion-4.5.1.dylib
Referenced from: /Applications/image-processing/ANTsR/src/ANTS/ANTS-build/lib/libl_antsRegistration.dylib
Reason: image not found
Error: package or namespace load failed for ‘ANTsR’
(ANTsR is the package I'm trying to get working)
I CAN get it to work by doing this on the command line first:
export DYLD_FALLBACK_LIBRARY_PATH=/Library/Frameworks/R.framework/Resources/lib
and then also opening the R.app from the command line:
open /Applications/R.app/
However, I can't seem to get R.app to know about
export DYLD_FALLBACK_LIBRARY_PATH=/Library/Frameworks/R.framework/Resources/lib
unless I do it this way.
So my questions are:
1) how can I get R.app to know about the DYLD_FALLBACK_LIBRARY_PATH? I tried putting it into my .Renviron file, but it doesn't work (maybe the syntax is supposed to be different?)
2) why does r on the command line know about dynamic libraries, but R.app does not?? This seems like a bug, but maybe there is a good reason for it?
Thanks for any suggestions,
-Tom
More information about the R-SIG-Mac
mailing list