[R-SIG-Mac] R compile from sources: error in make with gcc-4.7

Simon Zehnder szehnder at uni-bonn.de
Sun Sep 16 15:10:04 CEST 2012


Hi Simon,

below you find my configure and my make output while building R from sources with gcc-4.7.1 and including aqua (I used the R-patched). 

1. (Configure) Output: http://pastebin.com/GJ5DZncU

2. (Make) Output: http://pastebin.com/SHZWgA4P

Best regards

Simon

On Sep 16, 2012, at 3:16 AM, Simon Urbanek <simon.urbanek at r-project.org> wrote:

> Simon,
> 
> On Sep 15, 2012, at 6:56 PM, Simon Zehnder wrote:
> 
>> That is correct! My fault! Simon, I didn't want to blame you with this one. 
>> 
>> It compiles know and it works perfectly on the console. I am still interested, why it does not compile with aqua. Can somebody explain me why? 
>> 
> 
> Can you sent me the full output? I don't have the time to compile gcc from scratch right now and none of the usual suspects supports ObjC - that alone is a sign that no one really uses gcc on OS X (other than for ports) since Apple has abandoned it. My guess would be that the ObjC support is not as complete as in Apple's version - it's probably more geared toward GNUstep - but that's just a guess.
> 
> Cheers,
> Simon
> 
> 
> 
>> Best regards
>> 
>> Simon
>> 
>> On Sep 14, 2012, at 4:38 PM, Berend Hasselman <bhh at xs4all.nl> wrote:
>> 
>>> 
>>> On 14-09-2012, at 16:01, Simon Zehnder wrote:
>>> 
>>>> Running through the errors of my make output on http://pastebin.com/HXqLgH4b (without aqua) pulled my attention to the following error: 
>>>> 
>>>> In file included from ../../../../src/modules/lapack/vecLibg95c.c:5:0:
>>>> /System/Library/Frameworks/vecLib.framework/Headers/vecLib.h:22:4: error: #error "<vecLib/vecLib.h> is deprecated.  Please #include <Accelerate/Accelerate.h> and link to Accelerate.framework."
>>>> 
>>>> This error is, I think from you Simon, already commented on http://permalink.gmane.org/gmane.comp.lang.r.mac/7293. So I followed your advice there and added the flag CPPFLAGS=-D ACCELERATE to my configure command:
>>>> 
>>>> 1. (Configure) The whole command is:
>>>> 
>>>> ../configure CC="gcc-4.7 -arch $arch" CXX="g++-4.7 -arch $arch" F77="gfortran-4.7 -arch $arch" FC="gfortran-4.7 -arch $arch" OBJC="gcc-4.7 -arch $arch" --x-includes=/usr/X11/include/ --x-libraries=/usr/X11/lib/ --with-blas='-framework libVec' --with-lapack --without-aqua CPPFLAGS="-D ACCELERATE"
>>>> 
>>>> All runs fine - no errors nor warnings.
>>>> 
>>>> 2. (Make) I run the make via:
>>>> 
>>>> make -j 8
>>>> 
>>>> and I get the following errors: http://pastebin.com/5UfaMK6r
>>>> 
>>>> It seems that the flag CPPFLAGS=-D ACCELERATE does not modify the compilers work. 
>>>> 
>>>> Any suggestions here?
>>> 
>>> Reading the reply by Simon tells me that your CPPFLAGS doesn't agree with Simon's fix. It should be  CPPFLAGS=-D__ACCELERATE__
>>> 
>>> Berend
>>> 
>> 
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> 



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