[R-SIG-Mac] Tcltk hangs when I invoke RCommander

Simon Urbanek simon.urbanek at r-project.org
Tue Jul 12 23:07:37 CEST 2011


Andy,

please check that you have X11 installed. Also see whether clicking on the X11 icon in the GUI toolbar does start X11. Finally, try setting 
Sys.setenv(DISPLAY=":0.0")
before loading tcltk/Rcmdr.

If that doesn't help, please send me the crash log.

Thanks,
Simon




On Jul 12, 2011, at 4:44 PM, Skelton, James wrote:

> I am a brand new user of R, running the Macintosh implementation of R.app
> 2.13.1 on an iMac 21" (3.06 GHz Core 2 Duo) under OS 10.6.8. I have
> Administrator privileges on this machine.
> Upon invoking library(Rcmdr) , I get the notice that tcltk is being called
> up followed by a system prompt (>). However, the X11 window doesn't open,
> and nothing at all happens. When I type any legitimate command at the
> prompt, this appears in the R Console window:
> 
> *** caught bus error ***
> address 0x4, cause 'non-existent physical address'
> 
> Traceback:
> 1: sys.parent()
> 2: sys.function(sys.parent())
> 3: formals(sys.function(sys.parent()))
> 4: match.arg(encoding)
> 5: match(match.arg(encoding), c("", "bytes", "UTF-8"))
> 6: textConnection("rval", "w", local = TRUE)
> 7: capture.output(print(args(help)))
> 8: paste(capture.output(print(args(help))), collapse = "")
> 9: gsub("\\s+", " ", paste(capture.output(print(args(help))), collapse =
> ""))
> 10: doTryCatch(return(expr), name, parentenv, handler)
> 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> 12: tryCatchList(expr, classes, parentenv, handlers)
> 13: tryCatch(expr, error = function(e) {    call <- conditionCall(e)    if
> (!is.null(call)) {        if (identical(call[[1L]], quote(doTryCatch)))
>         call <- sys.call(-4L)        dcall <- deparse(call)[1L]
> prefix <- paste("Error in", dcall, ": ")        LONG <- 75L        msg <-
> conditionMessage(e)        sm <- strsplit(msg, "\n")[[1L]]        w <- 14L
> + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")        if
> (is.na(w))             w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
>                type = "b")        if (w > LONG)             prefix <-
> paste(prefix, "\n  ", sep = "")    }    else prefix <- "Error : "    msg
> <- paste(prefix, conditionMessage(e), "\n", sep = "")
> .Internal(seterrmessage(msg[1L]))    if (!silent &&
> identical(getOption("show.error.messages"),         TRUE)) {
> cat(msg, file = stderr())        .Internal(printDeferredWarnings())    }
> invisible(structure(msg, class = "try-error"))})
> 14: try(gsub("\\s+", " ", paste(capture.output(print(args(help))),
> collapse = "")), silent = TRUE)
> 
> Possible actions:
> 1: abort (with core dump, if enabled)
> 2: normal R exit
> 3: exit R without saving workspace
> 4: exit R saving workspace
> 
> 
> 
> I've forwarded the entire core dump to Apple and have a copy of it but
> have no idea how to make sense of it.
> Odd thing is, this problem doesn't occur on my 2008 Macbook at home, which
> runs the same Mac OS. It's peculiar to the iMac at my worksite. As I'm
> hoping to use R in some of my advanced undergrad teaching, it'll be
> helpful to solve this problem so my students can take advantage of the
> RCommander GUI.
> 
> Thanks for any light you can shed on this!
> 
> --Andy Skelton
> 
> *****************************
> J.A. Skelton      
> Dept. of Psychology, Dickinson College
> Carlisle, PA 17013-2896
> E-mail: skelton at dickinson.edu
> Phone: 717-245-1309
> *****************************
> 
> 
> 
> 
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