[R-SIG-Mac] gfortran, tclck and /usr/local

Simon Urbanek simon.urbanek at r-project.org
Mon Jul 11 18:27:19 CEST 2011 

On Jul 11, 2011, at 12:05 PM, Federico Calboli wrote:

> Hi,
> 
> can I ask if anyone can tell me which of these files belongs to the Gfortran and tcltk R Mac tools instalation please:
> 

I suppose you mean GNU Fortran - but which one? The recent ones live along Xcode so the answer would be none. If you have the older, separate Fortran then it has an uninstaller script that lists all files - it should be in /usr/local/bin/gfortran-uninstall or you can consult pkgutils (see below).

As for tcltk, this is the list of its files in /usr/local/lib:
Tktable2.9
libtcl8.5.dylib
libtclstub8.5.a
libtk8.5.dylib
libtkstub8.5.a
tcl8
tcl8.5
tclConfig.sh
tk8.5
tkConfig.sh

But in either case, you can check installed files very easily using pkgutil - it is very powerful and can tell you which files are installed by whom and vice versa.
For example:

Fino:~$ pkgutil --file-info /usr/local/lib/tclConfig.sh 
volume: /
path: /usr/local/lib/tclConfig.sh

pkgid: org.r-project.other.tcltk.x11
pkg-version: 8.5.5
install-time: 1224629182
uid: 0
gid: 0
mode: 644

Fino:~$ pkgutil --files org.r-project.other.tcltk.x11
usr
usr/local
usr/local/bin
usr/local/bin/tclsh8.5
usr/local/bin/wish8.5
usr/local/include
usr/local/include/tcl.h
usr/local/include/tclDecls.h
usr/local/include/tclPlatDecls.h
usr/local/include/tclTomMath.h
usr/local/include/tclTomMathDecls.h
usr/local/include/tk.h
[...]


Fino:~$ pkgutil --files org.r-project.mac.tools.gfortran
usr
usr/local
usr/local/bin
usr/local/bin/gfortran
usr/local/bin/gfortran-4.0
usr/local/bin/gfortran-4.2
usr/local/bin/gfortran-uninstall
usr/local/bin/i686-apple-darwin8-gfortran-4.2
usr/local/bin/powerpc-apple-darwin8-gfortran-4.2


Cheers,
Simon




> :~$ ls -l /usr/local/lib
> total 205784
> drwxr-xr-x   4 root  wheel       136 15 Dec  2009 ImageMagick-6.5.8
> drwxr-xr-x   4 root  wheel       136 17 Apr  2010 ImageMagick-6.6.1
> drwxr-xr-x   8 root  wheel       272 14 Apr 13:16 Tktable2.9
> drwxr-xr-x   4 root  wheel       136 21 Apr  2008 gcc
> -rw-rw-r--   1 root  wheel    736903 24 Feb  2008 libgcc_s.1.dylib
> -rw-rw-r--   1 root  wheel     33144 24 Feb  2008 libgcc_s.10.4.dylib
> -rw-rw-r--   1 root  wheel     33508 24 Feb  2008 libgcc_s.10.5.dylib
> lrwxr-xr-x   1 root  wheel        16 14 Apr 13:15 libgcc_s_ppc64.1.dylib -> libgcc_s.1.dylib
> lrwxr-xr-x   1 root  wheel        16 14 Apr 13:15 libgcc_s_x86_64.1.dylib -> libgcc_s.1.dylib
> -rwxrwxr-x   1 root  wheel   8094839 24 Feb  2008 libgfortran.2.0.0.dylib
> lrwxr-xr-x   1 root  wheel        23 14 Apr 13:15 libgfortran.2.dylib -> libgfortran.2.0.0.dylib
> -rw-rw-r--   1 root  wheel  13836364 24 Feb  2008 libgfortran.a
> lrwxr-xr-x   1 root  wheel        23 14 Apr 13:15 libgfortran.dylib -> libgfortran.2.0.0.dylib
> -rwxrwxr-x   1 root  wheel       779 24 Feb  2008 libgfortran.la
> -rwxr-xr-x   1 root  wheel  27914344  4 Feb  2009 libgs.8.64.dylib
> lrwxr-xr-x   1 root  wheel        16 18 Mar  2010 libgs.8.dylib -> libgs.8.64.dylib
> lrwxr-xr-x   1 root  wheel        31 18 Mar  2010 libgs.dylib -> /usr/local/lib/libgs.8.64.dylib
> -rw-r--r--   1 root  wheel  38619488 29 Sep  2009 libgsl.a
> -rwxr-xr-x   1 root  wheel       871 29 Sep  2009 libgsl.la
> -rw-r--r--   1 root  wheel   5569888 29 Sep  2009 libgslcblas.a
> -rwxr-xr-x   1 root  wheel       884 29 Sep  2009 libgslcblas.la
> -r-xr-xr-x   1 root  wheel   4820229 21 Oct  2008 libtcl8.5.dylib
> -rw-r--r--   1 root  wheel     11072 21 Oct  2008 libtclstub8.5.a
> -rwxr-xr-x   1 root  wheel   5602072 21 Oct  2008 libtk8.5.dylib
> -rw-r--r--   1 root  wheel     14304 21 Oct  2008 libtkstub8.5.a
> drwxrwxr-x   3 root  staff       102 29 Sep  2009 pkgconfig
> drwxrwxr-x   6 root  wheel       204 14 Apr 13:15 ppc64
> drwxr-xr-x   5 root  wheel       170 14 Apr 13:16 tcl8
> drwxr-xr-x  18 root  wheel       612 14 Apr 13:16 tcl8.5
> -rw-r--r--   1 root  wheel      7730 21 Oct  2008 tclConfig.sh
> drwxr-xr-x  37 root  wheel      1258 14 Apr 13:16 tk8.5
> -rw-r--r--   1 root  wheel      4017 21 Oct  2008 tkConfig.sh
> drwxrwxr-x   6 root  wheel       204 14 Apr 13:15 x86_64
> 
> 
> I would imagine that the two ImageMagick have nothing to do with R, and Tktable might also be unrelated. I am trying to see if any of these files/directoris can be removed, to avoid conflicts with homebrew.
> 
> Bw
> 
> F
> 
> 
> 
> --
> Federico C. F. Calboli
> Department of Epidemiology and Biostatistics
> Imperial College, St. Mary's Campus
> Norfolk Place, London W2 1PG
> 
> Tel +44 (0)20 75941602   Fax +44 (0)20 75943193
> 
> f.calboli [.a.t] imperial.ac.uk
> f.calboli [.a.t] gmail.com
> 
> _______________________________________________
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>

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