[R-SIG-Mac] R2.12 for Mac

Kasper Daniel Hansen kasperdanielhansen at gmail.com
Mon Nov 15 22:03:32 CET 2010


IF you are using a CRAN binary version of R, it is strange how fink is
involved at all.  You must have a messed up system

My best guess is that DYLD_LIBRARY_PATH or LD_LIBRARY_PATH has been
set (you can do
  echo $LD_LIBRARY_PATH
in the terminal).  Unset those variables, and proceed.

Kasper

On Mon, Nov 15, 2010 at 3:20 PM, Berend Hasselman <bhh at xs4all.nl> wrote:
>
> On 15-11-2010, at 20:45, steven mosher wrote:
>
>> I guess I've had the worst of it.
>>
>> With my last clean install  I even killed my ability to run R from terminal
>>
>> R version 2.12.0 (2010-10-15)
>> Copyright (C) 2010 The R Foundation for Statistical Computing
>> ISBN 3-900051-07-0
>> Platform: i386-apple-darwin9.8.0/i386 (32-bit)
>>
>>
>> R is free software and comes with ABSOLUTELY NO WARRANTY.
>> You are welcome to redistribute it under certain conditions.
>> Type 'license()' or 'licence()' for distribution details.
>>
>> dyld: lazy symbol binding failed: Symbol not found: _iconv_open
>>  Referenced from: /Library/Frameworks/R.
>> framework/Resources/lib/i386/libR.dylib
>>  Expected in: /sw/lib/libiconv.2.dylib
>>
>> dyld: Symbol not found: _iconv_open
>>  Referenced from:
>> /Library/Frameworks/R.framework/Resources/lib/i386/libR.dylib
>>  Expected in: /sw/lib/libiconv.2.dylib
>>
>
>
> /sw/...   is a Fink thing.
> Somewhere in your .profile  Fink "things" are being set.
> When you open a terminal and do "set" what do you get?
> What does echo $PATH show?
> etc.,...
>
>
> I did an otool  -L on /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib l and got this
>
> libR.dylib:
>        /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib (compatibility version 2.12.0, current version 2.12.0)
>        /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libRblas.dylib (compatibility version 0.0.0, current version 0.0.0)
>        /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libgfortran.2.dylib (compatibility version 3.0.0, current version 3.0.0)
>        /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation (compatibility version 150.0.0, current version 476.19.0)
>        /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libreadline.5.2.dylib (compatibility version 5.0.0, current version 5.2.0)
>        /usr/lib/libz.1.dylib (compatibility version 1.0.0, current version 1.2.3)
>        /usr/lib/libicucore.A.dylib (compatibility version 1.0.0, current version 36.0.0)
>        /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 111.1.5)
>        /usr/lib/libiconv.2.dylib (compatibility version 7.0.0, current version 7.0.0)
>        /usr/lib/libgcc_s.1.dylib (compatibility version 1.0.0, current version 1.0.0)
>
>
> Berend
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