[R-SIG-Mac] Mac GUI for 2.9.0 alpha and Rgraphviz

[Simon Urbanek]

On Mar 24, 2009, at 13:42 , William Revelle wrote:

> Simon and Kasper,
>
> I have gotten around the problem of the broken entry points by  
> directly installing source files  by
>> source("http://bioconductor.org/biocLite.R")
>> biocLite("graph")
> and
>> biocLite("Rgraphviz").
> Now, everything works like a charm (again).
>
> As I am sure you know, there is still a problem with installing from  
> the Packages and Data menu:
>
> Error: could not find function "package.manager"
> Error: could not find function "browse.pkgs"
>

That's fixed in rev. 5376 of the GUI. Please update from the nightlies  
tomorrow.

Thanks,
Simon


> I am using R.app
> R.app GUI 1.27 (5372 Tiger build 32-bit), S.Urbanek & S.M.Iacus,
>
> R version 2.9.0 alpha (2009-03-23 r48200)
> i386-apple-darwin8.11.1
>
> locale:
> en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] grid      stats     graphics  grDevices utils     datasets   
> methods [8] base
> other attached packages:
> [1] GPArotation_2008.05-1 Rgraphviz_1.21.9      graph_1.21.4         
> [4] MASS_7.2-46           psych_1.0-67
> loaded via a namespace (and not attached):
> [1] cluster_1.11.12 tools_2.9.0
>
> Best wishes,
>
> Bill
>
>
> At 5:56 PM -0400 3/23/09, Simon Urbanek wrote:
>> On Mar 23, 2009, at 17:33 , William Revelle wrote:
>>
>>> Simon and Kasper,
>>>
>>> Simon wrote that
>>>>>
>>>>> I installed it by hand.  Copying it over from the R2.8.1 library  
>>>>> into the 2.9.0 (alpha) library.
>>>>
>>>> That won't work. The paths to libR are entirely different - you  
>>>> have to re-compile between R 2.8.x and R 2.9.x.
>>>
>>> That is fine.  However, I have the other problem (not related to  
>>> the Rgraphviz problem) that I can not download packages because of  
>>> the installer and package manager error.
>>>
>>> rror: could not find function "data.manager"
>>> Error: could not find function "browse.pkgs"
>>> Error: could not find function "browse.pkgs"
>>> Error: could not find function "package.manager"
>>
>> Me culpa - those entry points have been removed, so the GUI needs  
>> updating. Will fix and keep you posted. Thanks for reporting,
>> Simon
>>
> ...
>
>
> -- 
> William Revelle		http://personality-project.org/revelle.html
> Professor			http://personality-project.org/personality.html
> Department of Psychology             http://www.wcas.northwestern.edu/psych/
> Northwestern University	http://www.northwestern.edu/
> Attend  ISSID/ARP:2009               http://issid.org/issid.2009/
>
>