[R-SIG-Mac] Error compiling 64 bit R-devel on Leopard (package graphics)

[Raphael Gottardo at UBC]

That was it. Thanks Simon!
I should have caught that.

Raphael
 
On Monday, June 29, 2009, at 06:10PM, "Simon Urbanek" <simon.urbanek at r-project.org> wrote:
>
>On Jun 29, 2009, at 3:11 PM, Raphael Gottardo at UBC wrote:
>
>> Hi All,
>>
>> I am trying to compile R-devel on a new MacPro but I am having some  
>> difficulties compiling from source.
>> The problem appears when I add the option --with-acqua, see the  
>> message error below. If I set --without-acqua, everything is fine.
>> I have searched the list for related issues but I could not find  
>> anything that would help me. There is an email from Vince Carey with  
>> a similar issue, but no fix is posted as far as I could tell.
>>
>
>You have forgotten to set OBJC accordingly and thus you get the wrong  
>architecture for Obj-C files (see the error message). For an example  
>on how to build multiple archs (64-bit is just another architecture)  
>see R for Mac FAQ 2.5.
>
>Cheers,
>Simon
>
>
>> Here is the end of the building process:
>>
>> building package 'utils'
>> all.R is unchanged
>> make[4]: Nothing to be done for `iconvlist'.
>> building package 'grDevices'
>> all.R is unchanged
>> make[6]: `Makedeps' is up to date.
>> gcc -arch x86_64 -std=gnu99 -I../../../../include -I../../../include  
>> -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    - 
>> fPIC  -g -O2 -c chull.c -o chull.o
>> gcc -arch x86_64 -std=gnu99 -I../../../../include -I../../../include  
>> -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    - 
>> fPIC  -g -O2 -c devNull.c -o devNull.o
>> gcc -arch x86_64 -std=gnu99 -I../../../../include -I../../../include  
>> -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    - 
>> fPIC  -g -O2 -c devPicTeX.c -o devPicTeX.o
>> gcc -arch x86_64 -std=gnu99 -I../../../../include -I../../../include  
>> -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    - 
>> fPIC  -g -O2 -c devPS.c -o devPS.o
>> gcc -arch x86_64 -std=gnu99 -I../../../../include -I../../../include  
>> -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    - 
>> fPIC  -g -O2 -c devQuartz.c -o devQuartz.o
>> gcc -arch x86_64 -std=gnu99 -I../../../../include -I../../../include  
>> -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    - 
>> fPIC  -g -O2 -c init.c -o init.o
>> gcc -arch x86_64 -std=gnu99 -I../../../../include -I../../../include  
>> -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    - 
>> fPIC  -g -O2 -c qdBitmap.c -o qdBitmap.o
>> gcc -arch x86_64 -std=gnu99 -I../../../../include -I../../../include  
>> -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    - 
>> fPIC  -g -O2 -c qdPDF.c -o qdPDF.o
>> gcc -I../../../../include -I../../../include -I../../../../src/ 
>> include -DHAVE_CONFIG_H -I/usr/local/include   -fPIC  -g -O2 -c  
>> qdCocoa.m -o qdCocoa.o
>> gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,- 
>> headerpad_max_install_names -undefined dynamic_lookup -single_module  
>> -multiply_defined suppress -L/usr/local/lib -o grDevices.so chull.o  
>> devNull.o devPicTeX.o devPS.o devQuartz.o init.o qdBitmap.o qdPDF.o  
>> qdCocoa.o -framework AppKit -L../../../../lib -lR -Wl,-framework - 
>> Wl,CoreFoundation
>> ld warning: in qdCocoa.o, file is not of required architecture
>> building package 'graphics'
>> all.R is unchanged
>> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>>  unable to load shared library '/Users/gottarr/Downloads/trunk/ 
>> library/grDevices/libs/grDevices.so':
>>  dlopen(/Users/gottarr/Downloads/trunk/library/grDevices/libs/ 
>> grDevices.so, 6): Symbol not found: _QuartzCocoa_DeviceCreate
>>  Referenced from: /Users/gottarr/Downloads/trunk/library/grDevices/ 
>> libs/grDevices.so
>>  Expected in: dynamic lookup
>> Calls: <Anonymous> ... namespaceImport -> loadNamespace ->  
>> library.dynam -> dyn.load
>> Execution halted
>> make[4]: *** [mklazy] Error 1
>> make[3]: *** [all] Error 2
>> make[2]: *** [R] Error 1
>> make[1]: *** [R] Error 1
>> make: *** [R] Error 1
>>
>>
>> Here is the options that I use during configure:
>> ./configure CC='gcc -arch x86_64' CXX='g++ -arch x86_64'  
>> F77='gfortran -arch x86_64' FC='gfortran -arch x86_64' --with-blas='- 
>> framework vecLib' --with-lapack --with-aqua --with-readline -- 
>> without-tcltk --with-system-zlib
>>
>>
>> I have successfully compiled R-devel on my older MacPro running the  
>> exact same version of Leopard with gcc/gfortran 4.2, just a few days  
>> ago. So I don't really understand what's going on. Am I missing  
>> something trivial?
>> Note that the new machine I have has a "Nehalem" processor, could  
>> this explains the difference?
>>
>>
>> Here are some more info in case you need it:
>> got10:trunk gottarr$ sw_versProductName:	Mac OS XProductVersion:	 
>> 10.5.7
>> BuildVersion:	9J61
>> got10:trunk gottarr$ system_profiler | more
>> Hardware:
>>
>>    Hardware Overview:
>>
>>      Model Name: Mac Pro
>>      Model Identifier: MacPro4,1
>>      Processor Name: Quad-Core Intel Xeon
>>      Processor Speed: 2.93 GHz
>>      Number Of Processors: 2
>>      Total Number Of Cores: 8
>>      L2 Cache (per core): 256 KB
>>      L3 Cache (per processor): 8 MB
>>      Memory: 16 GB
>>      Processor Interconnect Speed: 6.4 GT/s
>>      Boot ROM Version: MP41.0081.B04
>>      SMC Version (system): 1.39f5
>>      SMC Version (processor tray): 1.39f5
>>
>> Thanks in advance,
>>
>> Raphael
>>
>> _______________________________________________
>> R-SIG-Mac mailing list
>> R-SIG-Mac at stat.math.ethz.ch
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>
>>
>
>
>