[R-SIG-Mac] make install fails

[Simon Urbanek]

I see - you have a rogue directory
/Library/Frameworks/R.framework/Resources
in all normal installations that is a symlink but apparently you may  
have used hard copy or something such that it's not a symlink.
If you remove that all should be well. What you have there is  
definitely not a clean system ;). I have put a guard about such  
strange framework setup in the R-devel, just in case.
Cheers,
Simon



On Dec 1, 2009, at 12:13 , Kasper Daniel Hansen wrote:

>
> On Dec 1, 2009, at 11:29 AM, Simon Urbanek wrote:
>
>> ls -l /Library/Frameworks/R.framework
>> ls -l /Library/Frameworks/R.framework/Versions
>> ls -l /Library/Frameworks/R.framework/Versions/2.11
>> ls -l /Library/Frameworks/R.framework/Versions/2.11/Resources
>
>
> This is my current state, after a failed sudo make install on R-2.10  
> and R-devel
>
> grue-1:~/> ls -l /Library/Frameworks/R.framework
> total 32
> lrwxr-xr-x  1 root  admin    24B Dec  1 09:41 Headers -> Versions/ 
> Current/Headers
> lrwxr-xr-x  1 root  admin    30B Dec  1 09:41 Libraries -> Versions/ 
> Current/Resources/lib
> lrwxr-xr-x  1 root  admin    31B Dec  1 09:41 PrivateHeaders ->  
> Versions/Current/PrivateHeaders
> lrwxr-xr-x  1 root  admin    18B Dec  1 09:41 R -> Versions/Current/R
> drwxrwxr-x  4 root  admin   136B Dec  1 09:41 Resources
> drwxr-xr-x  5 root  admin   170B Dec  1 09:41 Versions
> grue-1:~/> ls -l /Library/Frameworks/R.framework/Versions
> total 8
> drwxr-xr-x  6 root  admin   204B Nov 30 19:09 2.10
> drwxr-xr-x  6 root  admin   204B Dec  1 09:41 2.11
> lrwxr-xr-x  1 root  admin     4B Dec  1 09:41 Current -> 2.11
> grue-1:~/> ls -l /Library/Frameworks/R.framework/Versions/2.11
> total 16
> lrwxr-xr-x   1 root  admin    17B Dec  1 09:41 Headers -> Resources/ 
> include
> drwxr-xr-x   2 root  admin    68B Dec  1 09:27 PrivateHeaders
> lrwxr-xr-x   1 root  admin    24B Dec  1 09:41 R -> Resources/lib/ 
> libR.dylib
> drwxr-xr-x  16 root  admin   544B Dec  1 09:41 Resources
> grue-1:~/> ls -l /Library/Frameworks/R.framework/Versions/2.11/ 
> Resources
> total 928
> -rw-r--r--   1 root  admin    18K Dec  1 09:41 COPYING
> -rw-r--r--   1 root  admin   408K Dec  1 09:41 NEWS
> -rwxr-xr-x   1 root  admin   8.1K Dec  1 09:41 R
> -rwxr-xr-x   1 root  admin    14K Dec  1 09:41 Rscript
> -rw-r--r--   1 root  admin    46B Dec  1 09:41 SVN-REVISION
> drwxr-xr-x  28 root  admin   952B Dec  1 09:41 bin
> drwxr-xr-x  15 root  admin   510B Dec  1 09:41 doc
> drwxr-xr-x   4 root  admin   136B Dec  1 09:41 etc
> drwxr-xr-x  10 root  admin   340B Dec  1 09:41 include
> drwxr-xr-x   3 root  admin   102B Dec  1 09:26 lib
> drwxr-xr-x  30 root  admin   1.0K Dec  1 09:27 library
> drwxr-xr-x   4 root  admin   136B Dec  1 09:41 man1
> drwxr-xr-x   3 root  admin   102B Dec  1 09:26 modules
> drwxr-xr-x  11 root  admin   374B Dec  1 09:27 share
> grue-1:~/>
>
> Just for reference, my full build script is
> #!/bin/bash
> R_VERSION=devel
> SRCDIR=R-${R_VERSION}-src
> BUILDDIR=R-${R_VERSION}-build
>
> if [ ! -d ${SRCDIR} ]; then
>  svn co https://svn.r-project.org/R/trunk ${SRCDIR}
> fi
> cd ${SRCDIR}
> svn up || exit 1
> tools/rsync-recommended || exit 1
> tools/link-recommended || exit 1
> cd ..
> rm -rf ${BUILDDIR}
> mkdir ${BUILDDIR}
> cd ${BUILDDIR}
> LANG=C
> export LANG
> ../${SRCDIR}/configure SHELL='/bin/bash' \
>  r_arch=x86_64 \
>  CC="/usr/bin/gcc-4.2 -arch x86_64 -std=gnu99" \
>  CFLAGS="-g -O2 -std=gnu99 -march=nocona" \
>  CXX="/usr/bin/g++-4.2 -arch x86_64" \
>  CXXFLAGS="-g -O2 -march=nocona" \
>  OBJC="/usr/bin/gcc-4.2 -arch x86_64" \
>  F77="/usr/bin/gfortran-4.2 -arch x86_64" \
>  FFLAGS="-g -O2 -march=nocona" \
>  FC="/usr/bin/gfortran-4.2 -arch x86_64" \
>  FCFLAGS="-g -O2 -march=nocona" \
>  --x-includes=/usr/X11/include --x-libraries=/usr/X11/lib \
>  --with-system-zlib \
>  --with-blas='-framework vecLib' --with-lapack
>
>
>
>