[R-SIG-Mac] compiling R 2.9.0 failed on Mac OS 10.5.6

[Martin Renner]

I'm trying to compile R 2.9.0 from source on a MacBookPro (1.83 GHz  
Intel Core Duo, latest system software). I'm using the gfortran  
version from the R 2.9.0 GUI binary image and the following:

configure --disable-nls --with-aqua=no --enable-R-framework=no --with- 
x=no
make

This worked fine with R-2.8.1 but fails with the current version (see  
below). Using configure with defaults gives the same result. I have  
fink installed. Renaming /sw did not fix things either but resulted in  
a different failure (?). I don't know whether this is specific to my  
machine. I wondering whether there are any known conflicts with fink  
packages? Am I missing something obvious? Any pointers how to fix this  
would be much appreciated.

Martin


Martin Renner					
current address:
Alaska Maritime NWR
Homer, AK 99603, USA






R is now configured for i386-apple-darwin9.6.0

   Source directory:          /Users/martin/src/R-2.9.0
   Installation directory:    /usr/local

   C compiler:                gcc -std=gnu99  -g -O2
   Fortran 77 compiler:       gfortran  -g -O2

   C++ compiler:              g++  -g -O2
   Fortran 90/95 compiler:    gfortran -g -O2
   Obj-C compiler:	     gcc -g -O2

   Interfaces supported:      tcltk
   External libraries:        readline
   Additional capabilities:   PNG, JPEG, TIFF, iconv, cairo, ICU
   Options enabled:           shared BLAS, Java

   Recommended packages:      yes


[snip...]

gcc -std=gnu99 -I/Users/martin/src/R-2.9.0/src/extra/zlib -I/Users/ 
martin/src/R-2.9.0/src/extra/bzip2 -I/Users/martin/src/R-2.9.0/src/ 
extra/pcre  -I. -I../../src/include -I/Users/martin/src/R-2.9.0/src/ 
include -I/sw/include -I/usr/local/include -DHAVE_CONFIG_H    -g -O2 - 
c /Users/martin/src/R-2.9.0/src/main/attrib.c -o attrib.o
/Users/martin/src/R-2.9.0/src/main/attrib.c: In function ‘do_class’:
/Users/martin/src/R-2.9.0/src/main/attrib.c:531: warning: implicit  
declaration of function ‘S3Class’
/Users/martin/src/R-2.9.0/src/main/attrib.c:531: warning: assignment  
makes pointer from integer without a cast
/Users/martin/src/R-2.9.0/src/main/attrib.c: At top level:
/Users/martin/src/R-2.9.0/src/main/attrib.c:616: error: conflicting  
types for ‘S3Class’
/Users/martin/src/R-2.9.0/src/main/attrib.c:531: error: previous  
implicit declaration of ‘S3Class’ was here
/Users/martin/src/R-2.9.0/src/main/attrib.c: In function  
‘dimnamesgets1’:
/Users/martin/src/R-2.9.0/src/main/attrib.c:854: warning: implicit  
declaration of function ‘asCharacterFactor’
/Users/martin/src/R-2.9.0/src/main/attrib.c:854: warning: return makes  
pointer from integer without a cast
make[3]: *** [attrib.o] Error 1
make[3]: *** Waiting for unfinished jobs....
make[2]: *** [R] Error 2
make[1]: *** [R] Error 1
make: *** [R] Error 1


and without fink:

making util.d from /Users/martin/src/R-2.9.0/src/main/util.c
/Users/martin/src/R-2.9.0/src/main/util.c:1572:28: error: unicode/ 
utypes.h: No such file or directory
/Users/martin/src/R-2.9.0/src/main/util.c:1573:26: error: unicode/ 
ucol.h: No such file or directory
/Users/martin/src/R-2.9.0/src/main/util.c:1574:26: error: unicode/ 
uloc.h: No such file or directory
/Users/martin/src/R-2.9.0/src/main/util.c:1575:27: error: unicode/ 
uiter.h: No such file or directory
make[3]: *** [util.d] Error 1
make[2]: *** [R] Error 2
make[1]: *** [R] Error 1
make: *** [R] Error 1