[R-SIG-Mac] rimage doesn't install on Mac OS X 10.4

[Waichler, Scott R]

Jochen,

> Since the script is complaining about a missing libjpeg now, 
> you could try adding --with-jpeg-lib=[PATH_TO_YOUR_JPEG_LIB]
> to the configure command line, e.g.,
> 
> ./configure --with-fftw-include=/usr/local/include 
> --with-jpeg-include=/opt/local/include --with-jpeg-lib=/opt/local/lib

Thanks, I can now get past that hurdle.  The compiler is getting through
some of its work, but it still breaks down as follows.  This is from an
R session without sudo, in a Mac Terminal window.

For brevity, the key lines seem to be
ld: /Library/Frameworks/R.framework/../R.framework/R load command 14
unknown cmd field
/usr/bin/libtool: internal link edit command failed

Many hours later and still trying . . .thanks for your support!

Scott

> install.packages("rimage", repos="http://cran.fhcrc.org/",
type="source", configure.args="--with-jpeg-include=/opt/local/include
--with-jpeg-lib=/opt/local/lib")
Warning in install.packages("rimage", repos = "http://cran.fhcrc.org/",
:
  argument 'lib' is missing: using
'/home/waichler/Library/R/2.8/library'
trying URL 'http://cran.fhcrc.org/src/contrib/rimage_0.5-7.tar.gz'
Content type 'application/x-gzip' length 331029 bytes (323 Kb)
opened URL
==================================================
downloaded 323 Kb

* Installing *source* package 'rimage' ...
checking for g++... g++
checking for C++ compiler default output... a.out
checking whether the C++ compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking fftw.h usability... yes
checking fftw.h presence... yes
checking for fftw.h... yes
checking /opt/local/include/jpeglib.h usability... yes
checking /opt/local/include/jpeglib.h presence... yes
checking for /opt/local/include/jpeglib.h... yes
checking for inline... inline
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
** arch - ppc
g++ -arch ppc -I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc -g -O2
-I/opt/local/include/  -I/usr/local/include    -fPIC  -g -O2 -c
equalize.cpp -o equalize.o
gcc -arch ppc -std=gnu99
-I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc -g -O2
-I/opt/local/include/  -I/usr/local/include    -fPIC  -g -O2 -c
fftw_access_func.c -o fftw_access_func.o
g++ -arch ppc -I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc -g -O2
-I/opt/local/include/  -I/usr/local/include    -fPIC  -g -O2 -c
freqfilters.cpp -o freqfilters.o
g++ -arch ppc -I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc -g -O2
-I/opt/local/include/  -I/usr/local/include    -fPIC  -g -O2 -c
interface.cpp -o interface.o
gcc -arch ppc -std=gnu99
-I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc -g -O2
-I/opt/local/include/  -I/usr/local/include    -fPIC  -g -O2 -c jpegio.c
-o jpegio.o
jpegio.c: In function 'read_JPEG_file':
jpegio.c:108: warning: pointer targets in assignment differ in
signedness
gcc -arch ppc -std=gnu99
-I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc -g -O2
-I/opt/local/include/  -I/usr/local/include    -fPIC  -g -O2 -c
laplacian.c -o laplacian.o
laplacian.c: In function 'laplacian':
laplacian.c:14: warning: implicit declaration of function 'clearFrame'
g++ -arch ppc -I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc -g -O2
-I/opt/local/include/  -I/usr/local/include    -fPIC  -g -O2 -c
matrix.cpp -o matrix.o
gcc -arch ppc -std=gnu99
-I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc -g -O2
-I/opt/local/include/  -I/usr/local/include    -fPIC  -g -O2 -c smooth.c
-o smooth.o
gcc -arch ppc -std=gnu99
-I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc -g -O2
-I/opt/local/include/  -I/usr/local/include    -fPIC  -g -O2 -c sobel.c
-o sobel.o
g++ -arch ppc -dynamiclib -Wl,-headerpad_max_install_names
-mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module
-multiply_defined suppress -L/usr/local/lib -o rimage.so equalize.o
fftw_access_func.o freqfilters.o interface.o jpegio.o laplacian.o
matrix.o smooth.o sobel.o -L/opt/local/lib -ljpeg -lfftw
-F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework
-Wl,CoreFoundation
ld: /Library/Frameworks/R.framework/../R.framework/R load command 14
unknown cmd field
/usr/bin/libtool: internal link edit command failed
make: *** [rimage.so] Error 1
chmod:
/tmp_mnt/snow/files0/waichler/Library/R/2.8/library/rimage/libs/ppc/*:
No such file or directory
ERROR: compilation failed for package 'rimage'
** Removing '/tmp_mnt/snow/files0/waichler/Library/R/2.8/library/rimage'

The downloaded packages are in
        /tmp_mnt/snow/files0/waichler/tmp/RtmpGstodn/downloaded_packages
Warning message:
In install.packages("rimage", repos = "http://cran.fhcrc.org/",  :
  installation of package 'rimage' had non-zero exit status
>