[R-SIG-Mac] using several versions in Library/Frameworks simultanouesly
Kasper Daniel Hansen
khansen at stat.berkeley.edu
Thu Dec 11 05:54:34 CET 2008
Thanks a lot Patrick, I have now had some time to play with this in
detail, and have compiled the script I have replicated below. I run
that script post every make install I do.
I am slightly baffled by why R.framework/Resources is hardcoded into
the file
/Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R
and why it is not R.framework/Versions/2.9/Resources
I see no reason not to. The R in /usr/bin links to
ls -l /usr/bin/R
lrwxr-xr-x 1 root wheel 47B Jul 2 11:13 /usr/bin/R -> /Library/
Frameworks/R.framework/Resources/bin/R
but /Library/Frameworks/R.framework/Resources is already a symlink to /
Library/Frameworks/R.framework/Versions/Current
If this is changes, one should be able to switch between R versions
just by changing the symlink in Versions/Current as far as I can see
(but there is probably something I have missed). Something might need
to be done for Rscript as well.
This would certainly make it easier for me, and also slightly more
logical as I see it (but I am happy to be educated). Unfortunately I
don't think I can provide a patch to the configure script
Comments?
Kasper
#!/bin/bash
sudo ln -f -s /Library/Frameworks/R.framework/Versions/2.8/Resources/
R /usr/bin/R-2.8
sudo ln -f -s /Library/Frameworks/R.framework/Versions/2.8/Resources/
Rscript /usr/bin/Rscript-2.8
sudo ln -f -s /Library/Frameworks/R.framework/Versions/2.9/Resources/
R /usr/bin/R-devel
sudo ln -f -s /Library/Frameworks/R.framework/Versions/2.9/Resources/
Rscript /usr/bin/Rscript-devel
sudo rm /Library/Frameworks/R.framework/Versions/Current
sudo ln -f -s /Library/Frameworks/R.framework/Versions/2.8 /Library/
Frameworks/R.framework/Versions/Current
sudo sed -i tmp "s|R.framework/Resources|R.framework/Versions/2.8/
Resources|" /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R
sudo sed -i tmp "s|R.framework/Resources|R.framework/Versions/2.9/
Resources|" /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R
On Dec 9, 2008, at 9:31 , Patrick Aboyoun wrote:
> Kasper,
> When I want to have multiple versions of R on my mac, I hand edit
> the R script to explicitly reference the version of R I want to use.
> My guess is that within your /Library/Frameworks/R.framework/
> Versions/2.9/Resources/bin/R file you have references to /Library/
> Frameworks/R.framework/Resources instead of /Library/Frameworks/
> R.framework/Versions/2.9/Resources and /Library/Frameworks/
> R.framework/Resources is a symbolic link to /Library/Frameworks/
> R.framework/Versions/2.8/Resources.
>
>
> Patrick
>
>
> Kasper Daniel Hansen wrote:
>> I have two version of R installed in
>> /Library/Frameworks
>> version 2.8 patched and version 2.9 (R-devel). I have compiled them
>> myself. I know of Rswitch that allows me to switch (system-wide)
>> between the two versions. But I want to be able to use the two
>> versions at the same time, in different terminals (I am not using
>> R.app)
>>
>> I thought I could do this by making a symbolic link from my ~/Bin
>> folder (I have added this folder to my path), but even though it
>> seems to point to the right place (ok, something is wrong, so of
>> course it is not "right"), it still picks up the wrong version
>>
>> kasper-hansens-macbook:~/> which R-devel
>> /Users/khansen/Bin/R-devel
>> kasper-hansens-macbook:~/> ls -l Bin/R-devel
>> lrwxr-xr-x 1 khansen staff 60B Nov 11 12:02 Bin/R-devel -> /
>> Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R
>> kasper-hansens-macbook:~/> R-devel --version
>> R version 2.8.0 Patched (2008-12-05 r47091)
>> Copyright (C) 2008 The R Foundation for Statistical Computing
>> ISBN 3-900051-07-0
>>
>> Right now my system wide R, according to Rswitch, is R-2.8.
>>
>> What am I missing here? I know I can run R-devel if I just run it
>> from the directory where I compiled it, so something seems to
>> happen when I do make install.
>>
>> Kasper
>>
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