[R-SIG-Mac] gfortran question

Anand C. Patel acpatel at usa.net
Fri Nov 9 18:04:32 CET 2007


Does this mean that the Quartz/Aqua support has been backported into 2.6?

I have a working copy of R 2.6 compiled for both i386 and x86_64 (as advised)
that is working nicely with bioconductor packages.

The 64-bit version does allow me to run the large maSigPro analysis without
malloc errors, which is great!

> No. R-devel compiles just fine and it did so for quite a while. (FWIW:  
> R-2.6-branch compiles now, too.)
> > 2)  working configure commmands (in other words, should I still just  
> > be
> > typing in what's listed for building 64-bit R on Simon's web-site?  
> > with
> > changing "8.8.1" to "9.0.0")
> >
> The configure "command" supplied with R works just fine.

Does this mean we can use just ../R-patched/configure?  I would assume we'd
still need to generate both i386 and x86_64 versions using subdirectories and
specific configure calls i.e.:
../R-patched/configure CC='gcc -arch x86_64' CXX='g++ -arch x86_64' \
F77='gfortran -arch x86_64' FC='gfortran -arch x86_64' 'CFLAGS=-g -O3 
-I/readline/include -L/readline/lib' 'OBJCFLAGS=-g -O3 -I/readline/include
-L/readline/lib' 'LDFLAGS=-L/usr/local/lib' 'FFLAGS=-g -O3 
-I/readline/include -L/readline/lib ' 'CXXFLAGS=-g -O3 -I/readline/include
-L/readline/lib' 'FCFLAGS=-g -O3 -I/readline/include -L/readline/lib' \
r_arch=x86_64 \
 --with-blas='-framework vecLib' --with-lapack  \
--with-system-zlib --build=x86_64-apple-darwin9.0.0 \
--with-tk-config=/usr/local/lib/tkConfig.sh \

Is this not the case?

Anand C. Patel, MD
Washington University School of Medicine
acpatel at usa.net

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