[R-SIG-Mac] Problem loading libraries in 2.5

[Retzer Joe]

Hi Simon,

   In following your advice at UseR last week I,

      1. removed old packages from the /Library/Frameworks/ 
R.framework/Resources/library directory and
      2. reinstalled the packages from the main repository in Austria

This has solved the problem. Thanks very much for taking the time to  
help me out. Thanks also for the excellent presentation at UseR.

Take care,
Joe



On Aug 12, 2007, at 10:50 AM, Simon Urbanek wrote:

>
> On Aug 6, 2007, at 3:14 PM, Joseph Retzer wrote:
>
>> Hi All,
>>   I think someone said this was fixed but I seem to still be having
>> the same problems loading packages into R 2.5 on the Mac. I updated
>> all packages and re-installed the latest build from http://
>> r.research.att.com.
>> My error messages and version information are below. Have I missed
>> something?
>
>
> I cannot reproduce it with the CRAN release of R and packages. Maybe
> the CRAN mirror you're using is broken? Anyway, a fix is always to
> install the gfortran that comes with R (or you can get it separately
> from the "tools" directory on CRAN).
>
> Cheers,
> Simon
>
>
>>
>> library(cluster)
>> Error in dyn.load(x, as.logical(local), as.logical(now)) :
>>     unable to load shared library '/Library/Frameworks/R.framework/
>> Versions/2.5/Resources/library/cluster/libs/i386/cluster.so':
>>   dlopen(/Library/Frameworks/R.framework/Versions/2.5/Resources/
>> library/cluster/libs/i386/cluster.so, 6): Library not loaded: /usr/
>> local/lib/libgfortran.2.dylib
>>   Referenced from: /Library/Frameworks/R.framework/Versions/2.5/
>> Resources/library/cluster/libs/i386/cluster.so
>>   Reason: image not found
>> Error: package/namespace load failed for 'cluster'
>>> library(doBy)
>> Loading required package: Hmisc
>> Error in dyn.load(x, as.logical(local), as.logical(now)) :
>>     unable to load shared library '/Library/Frameworks/R.framework/
>> Versions/2.5/Resources/library/cluster/libs/i386/cluster.so':
>>   dlopen(/Library/Frameworks/R.framework/Versions/2.5/Resources/
>> library/cluster/libs/i386/cluster.so, 6): Library not loaded: /usr/
>> local/lib/libgfortran.2.dylib
>>   Referenced from: /Library/Frameworks/R.framework/Versions/2.5/
>> Resources/library/cluster/libs/i386/cluster.so
>>   Reason: image not found
>> Error: package 'Hmisc' could not be loaded
>>>
>>>
>>> R.Version()
>> $platform
>> [1] "i386-apple-darwin8.10.1"
>>
>> $arch
>> [1] "i386"
>>
>> $os
>> [1] "darwin8.10.1"
>>
>> $system
>> [1] "i386, darwin8.10.1"
>>
>> $status
>> [1] "Patched"
>>
>> $major
>> [1] "2"
>>
>> $minor
>> [1] "5.1"
>>
>> $year
>> [1] "2007"
>>
>> $month
>> [1] "08"
>>
>> $day
>> [1] "02"
>>
>> $`svn rev`
>> [1] "42432"
>>
>> $language
>> [1] "R"
>>
>> $version.string
>> [1] "R version 2.5.1 Patched (2007-08-02 r42432)"
>>
>>>
>>
>>
>> 	[[alternative HTML version deleted]]
>>
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>>
>>
>
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