[R-SIG-Mac] problem installing BMA with R.Gui (2.1.0) on Tiger

[Rob J Goedman]

Anestis,

Trying this on R.app for R-2.1.0 following the hints on Simon's Wiki  
page:

* Installing *source* package 'BMA' ...
** libs
gfortran   -fno-common  -g -O2 -c fwleaps.f -o fwleaps.o
     npackage installation failed
** Removing '/Library/Frameworks/R.framework/Versions/2.1.0/Resources/ 
library/BMA'
** Restoring previous '/Library/Frameworks/R.framework/Versions/2.1.0/ 
Resources/library/BMA'


and in the console:

In file fwleaps.f:240

        sbs(curr)=cl(lb)
           1
Error: Array index at (1) must be of INTEGER type
In file fwleaps.f:255

        rss(curr)=rsret
           1
Error: Array index at (1) must be of INTEGER type
make: *** [fwleaps.o] Error 1
ERROR: compilation failed for package 'BMA'

 From below output you have not updated the Fortran compiler, nor  
updated the
links as on the TigeR page of the Wiki (1st 2 sections, I did make a  
small update
to the page yesterday).

 From above output it seems the gcc-4 Fortran is more strict then  
g77. I believe
Stefano has compiled a binary for 2.1.0, but I guess that failed as  
well as the
package is kind of empty. I can have a look after this weekend.

Rob

On May 5, 2005, at 4:24 AM, Anestis Antoniadis wrote:

> I am trying to install the updated BMA package but here what I have
>
> * Installing *source* package 'BMA' ...
> ** libs
> g77   -fno-common  -g -O2 -c fwleaps.f -o fwleaps.o
> gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o
> BMA.so fwleaps.o  -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -
> lg2c -lSystem -lcc_dynamic -framework R
> ** R
> ** data
> ** preparing package for lazy loading
> Error in dyn.load(x, as.logical(local), as.logical(now)) :
>      unable to load shared library '/Library/Frameworks/R.framework/
> Resources/library/grDevices/libs/grDevices.so':
>    dlopen(/Library/Frameworks/R.framework/Resources/library/grDevices/
> libs/grDevices.so, 6): Library not loaded: /System/Library/Frameworks/
> ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/
> Versions/A/Resources/libTIFF.dylib
>    Referenced from: /System/Library/Frameworks/
> ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/
> Versions/A/ImageIO
>    Reason: Incompatible library version: ImageIO requires version
> 1.0.0 or later, but libTIFF.dylib provides version 0.0.0
> Loading required package: grDevices
>      npackage installation failed
> Error in dyn.load(x, as.logical(local), as.logical(now)) :
>      unable to load shared library '/Library/Frameworks/R.framework/
> Resources/library/grDevices/libs/grDevices.so':
>    dlopen(/Library/Frameworks/R.framework/Resources/library/grDevices/
> libs/grDevices.so, 6): corrupt binary, library ordinal too big
> ** Removing '/Users/anestisa/Library/R/library/BMA'
> ** Restoring previous '/Users/anestisa/Library/R/library/BMA'
> In addition: Warning message:
> package grDevices in options("defaultPackages") was not found
> Error: package 'grDevices' could not be loaded
> Execution halted
> ERROR: lazy loading failed for package 'BMA'
>
> I followed the instructions by simon in his Wiki pages but no
> difference.
> Many thanks for any hints
> Anestis
>
> ====================================================
> Prof. Anestis ANTONIADIS
> Laboratoire de Modelisation et Calcul(LMC-IMAG)
> Universite Joseph Fourier
> Tour IRMA
> B.P.53
> 38041 Grenoble CEDEX 9
> FRANCE
>
> Tel:(33) (0) 476514306
> Fax:(33) (0) 476631263
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>
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