[R-SIG-Mac] R-aqua crashing after upgrade to 1.9.1
Jim McLoughlin
jimmcloughlin at earthlink.net
Fri Jul 23 19:20:05 CEST 2004
Hi,
I upgraded yesterday from 1.9.0 to 1.9.1 using the R.dmg on CRAN. I
didn't erase any of the existing frameworks/apps, and assumes the
installer would overwrite them as necessary.
R crashes whenever I disconnect from my Postgresql database:
library("chron") #needed for date columns
library("Rdbi")
library("Rdbi.PgSQL")
pcon <-
dbConnect(PgSQL(),host="localhost",dbname="test",user="postgres",passwor
d="<mypassword>")
dbListTables(pcon) #works fine, as do other SQL operations
dbDisconnect(pcon) #causes R to pause (beachball), then crash
I also experience a crash after issuing help.search
I am not sure whether this is related to OSX build of R, or the dbi
module, but I would guess the former.
The simplest thing for me to try is wiping and reinstalling R. Is it
just a matter of removing
/Library/Frameworks/R.framework
/Applications/R.app
~/Library/Preferences/R.bin.plist
?
Or are there other files to remove. Also, I append the crash log
generated after the dbDisconnect command in case it provides any useful
info.
Thanks for any help.
Jim
---------------------------------------------------------
Date/Time: 2004-07-23 10:17:42 -0700
OS Version: 10.3.4 (Build 7H63)
Report Version: 2
Command: R.bin
Path: /Library/Frameworks/R.framework/Resources/bin/R.bin
Version: 1.9.1 (R 1.9.1)
PID: 1417
Thread: 0
Exception: EXC_BAD_ACCESS (0x0001)
Codes: KERN_PROTECTION_FAILURE (0x0002) at 0x00000018
Thread 0 Crashed:
0 R.bin 0x000c072c printAttributes + 0x1b8 (print.c:683)
1 R.bin 0x000c0560 Rf_PrintValueRec + 0x468 (print.c:644)
2 R.bin 0x000c09bc Rf_PrintValueEnv + 0x94 (print.c:781)
3 R.bin 0x00082a60 Rf_ReplIteration + 0x1f8 (main.c:255)
4 R.bin 0x00082b80 R_ReplConsole + 0x88 (main.c:299)
5 R.bin 0x00083530 run_Rmainloop + 0x78 (main.c:657)
6 R.bin 0x000ef5a4 main + 0x14 (system.c:102)
7 R.bin 0x0000205c _start + 0x17c (crt.c:267)
8 R.bin 0x00001edc start + 0x30
PPC Thread State:
srr0: 0x000c072c srr1: 0x0200f030 vrsave: 0x00000000
cr: 0x84002242 xer: 0x00000004 lr: 0x000c0720 ctr: 0x90006e20
r0: 0x000c0720 r1: 0xbffff380 r2: 0x00000000 r3: 0x00000000
r4: 0x80808080 r5: 0x00000000 r6: 0x80808080 r7: 0x00000000
r8: 0x00000000 r9: 0x00180580 r10: 0x000ecf2c r11: 0x0017a390
r12: 0x90006e20 r13: 0x001ab354 r14: 0x001ab34c r15: 0x001aa32c
r16: 0x00180580 r17: 0x01800038 r18: 0x001a78d8 r19: 0x001ab3b0
r20: 0x00000000 r21: 0x00000000 r22: 0x00000000 r23: 0x00000000
r24: 0x00000000 r25: 0x01890934 r26: 0x01890934 r27: 0x00000000
r28: 0x001a0580 r29: 0x001a78d8 r30: 0x00000000 r31: 0x000c0580
Binary Images Description:
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/Library/Frameworks/R.framework/Resources/bin/R.bin
0x483000 - 0x497fff R_aqua.so
/Library/Frameworks/R.framework/Resources/modules/R_aqua.so
0x605000 - 0x62ffff libreadline.4.3.dylib
/Library/Frameworks/R.framework/Resources/bin/Frameworks/
libreadline.4.3.dylib
0x2008000 - 0x217dfff libR.dylib
/Library/Frameworks/R.framework/Resources/bin/libR.dylib
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/Library/Frameworks/R.framework/Versions/1.9.1/Resources/library/
methods/libs/methods.so
0x4e2a000 - 0x4e2efff com.apple.CommonCocoaPanels 1.1
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MacOS/CommonCocoaPanels
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/Library/Frameworks/R.framework/Versions/1.9.1/Resources/library/
stats/libs/stats.so
0x4fd0000 - 0x4fe1fff Rdbi.PgSQL.so
/Users/jim/Library/R/library/Rdbi.PgSQL/libs/Rdbi.PgSQL.so
0x8fe00000 - 0x8fe4ffff dyld /usr/lib/dyld
0x90000000 - 0x90122fff libSystem.B.dylib /usr/lib/libSystem.B.dylib
0x90190000 - 0x9023dfff com.apple.CoreFoundation 6.3.4
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(???) /System/Library/Frameworks/IOKit.framework/Versions/A/IOKit
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(???) /System/Library/Frameworks/ApplicationServices.framework/
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(500.56) /System/Library/Frameworks/Foundation.framework/Versions/C/
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(???) /System/Library/Frameworks/SystemConfiguration.framework/
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(???) /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon
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(63) /System/Library/PrivateFrameworks/Bom.framework/Versions/A/Bom
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/System/Library/Frameworks/ApplicationServices.framework/Versions/A/
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(???) /System/Library/Frameworks/ApplicationServices.framework/
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1.3.2 /System/Library/Frameworks/ApplicationServices.framework/
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0x917e0000 - 0x917f0fff com.apple.speech.recognition.framework
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0x91810000 - 0x9182afff com.apple.openscripting 1.2.1
(???) /System/Library/Frameworks/Carbon.framework/Versions/A/
Frameworks/OpenScripting.framework/Versions/A/OpenScripting
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2.1.0 /System/Library/Frameworks/Carbon.framework/Versions/A/
Frameworks/ImageCapture.framework/Versions/A/ImageCapture
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Frameworks/Help.framework/Versions/A/Help
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(90) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/
SecurityHI.framework/Versions/A/SecurityHI
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AudioUnit
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