[R-sig-hpc] snowfall error
Raphael Gottardo
bioclist at me.com
Tue Jun 22 16:13:54 CEST 2010
In that case, send us the command and more details about your configuration. What sort of cluster are you using? (i.e. several machines, one machine with multiple cores).
What type of connection? Sockets, etc.
Also what's your session Info?
On Jun 22, 2010, at 10:07 AM, Unger Kristian wrote:
Thanks you Raphael. Unfortunately deleting ~/.sfCluster does not help.
Kristian
On 22/06/10 14:18, Raphael Gottardo wrote:
This can happen sometimes, try to remove the ~/.sfCluster directory, quit R and try again.
Raphael
On Jun 22, 2010, at 8:32 AM, Unger Kristian wrote:
Hi!
I am a quite new user of the snowfall package and when I try to run a
wrapper function (which works fine in normal serial mode) in parallel
mode I get the following error message:
R snowfall Error in serialize(node$con) : error reading from connection
Looking this error message up in Google did not help much so I would
appreciate if I could get any advice from here.
Best wishes
Kristian
--
_____
Dr Kristian Unger
Bioinformaticist Chernobyl Tissue Bank
Department of Surgery and Cancer
Imperial College London
Rm G02, Ground floor G Block
Hammersmith Hospital
Du Cane Road,
London W12 0HS
Tel +44-20-8383-2443
Mob +44-795-1080619
http://www1.imperial.ac.uk/medicine/about/divisions/is/histo/
http://wwwchernobyltissuebank.com
[[alternative HTML version deleted]]
_______________________________________________
R-sig-hpc mailing list
R-sig-hpc at r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-hpc
--
_____
Dr Kristian Unger
Bioinformaticist Chernobyl Tissue Bank
Department of Surgery and Cancer
Imperial College London
Rm G02, Ground floor G Block
Hammersmith Hospital
Du Cane Road,
London W12 0HS
Tel +44-20-8383-2443
Mob +44-795-1080619
http://www1.imperial.ac.uk/medicine/about/divisions/is/histo/
http://www.chernobyltissuebank.com
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://stat.ethz.ch/pipermail/r-sig-hpc/attachments/20100622/8c81e465/attachment.html>
More information about the R-sig-hpc
mailing list