[R-sig-hpc] snowfall error

Raphael Gottardo bioclist at me.com
Tue Jun 22 15:18:33 CEST 2010


This can happen sometimes, try to remove the ~/.sfCluster directory, quit R and try again.

Raphael

On Jun 22, 2010, at 8:32 AM, Unger Kristian wrote:

> Hi!
> 
> I am a quite new user of the snowfall package and when I try to run a 
> wrapper function (which works fine in normal serial mode) in parallel 
> mode I get the following error message:
> 
> R snowfall Error in serialize(node$con) : error reading from connection
> 
> Looking this error message up in Google did not help much so I would 
> appreciate if I could get any advice from here.
> 
> Best wishes
> 
> Kristian
> 
> -- 
> _____
> 
> Dr Kristian Unger
> 
> Bioinformaticist Chernobyl Tissue Bank
> 
> Department of Surgery and Cancer
> 
> Imperial College London
> 
> Rm G02, Ground floor G Block
> Hammersmith Hospital
> Du Cane Road,
> London W12 0HS
> 
> Tel +44-20-8383-2443
> 
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> 
> http://www1.imperial.ac.uk/medicine/about/divisions/is/histo/
> http://www.chernobyltissuebank.com
> 
> 
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> 
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