[R-sig-hpc] Submit condor job, executable = R
Kevin.Buckley at ecs.vuw.ac.nz
Kevin.Buckley at ecs.vuw.ac.nz
Wed Jun 16 01:17:09 CEST 2010
Given that you have an R execution working when you use a .bat file
as the Condor executable, why not carry on doing that but pass the
GridR generated R script as an argument to the batch fle?
In the batch file, something like:
c:\"program files"\r\r-2.6.0\bin\r.exe --no-save < %1
(The %1 is the first argument as seen by the batch file,
%2 the 2nd and so on)
In the Condor command file:
executable = C:\Belfry\DoMyR.bat
arguments = C:\Temp\GridRTmp\Remscript.R
Apologies if the actual R command is not exact there, (I am not
an "R man" but have some run R stuff under Condor for others !)
but you'll get the underlying idea.
--
Kevin M. Buckley Room: CO327
School of Engineering and Phone: +64 4 463 5971
Computer Science
Victoria University of Wellington
New Zealand
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