[R-sig-Geo] Monte Carlo with mc2d
Todd McDonnell
todd.mcdonnell at esenvironmental.com
Tue Jan 30 21:41:38 CET 2018
This works great, many thanks Vijay. I have updated the code on Stack Overflow as well.
Todd
From: Vijay Lulla [mailto:vijaylulla at gmail.com]
Sent: Tuesday, January 30, 2018 11:36 AM
To: Todd McDonnell
Cc: R-sig-geo Mailing List
Subject: Re: [R-sig-Geo] Monte Carlo with mc2d
Return the min,mean,max values as a list of numbers and calc will create a RasterStack. ?`calc` states that 'calc' returns a RasterBrick if 'fun' returns more than one number. Below are a few minor changes I had to make to your function.
fun <- function(x) {
# Convert each raster to mcnode object
dA <- mcdata(x[1], type="0")
dB <- mcdata(x[2], type="0")
dC <- mcdata(x[3], type="0")
dD <- mcdata(x[4], type="0")
# Define uniform distirbutions for each raster
stA <- mcstoc(runif, type="U", min=dA-uA, max=dA+uA, rtrunc=TRUE, linf=0) # modified: fixed typo!
stB <- mcstoc(runif, type="U", min=dA-uB, max=dA+uB, rtrunc=TRUE, linf=0)
stC <- mcstoc(runif, type="U", min=dA-uC, max=dA+uC, rtrunc=TRUE, linf=0)
stD <- mcstoc(runif, type="U", min=dA-uD, max=dA+uD, rtrunc=TRUE, linf=0)
# Apply Monte Carlo to this equation
CL <- stA + stB + stC + stD
# Extract the min, mean, and max CL from the 1000 iterations
c(min(CL), mean(CL), max(CL)) # modified: return vector of numbers
}
HTH,
Vijay.
On Tue, Jan 30, 2018 at 11:23 AM, Todd McDonnell <todd.mcdonnell at esenvironmental.com> wrote:
Hi all,
I posted a question to Stack Overflow a couple weeks ago regarding Monte
Carlo simulation with mc2d with no replies:
https://stackoverflow.com/questions/48306933/grid-based-monte-carlo-simulati <https://stackoverflow.com/questions/48306933/grid-based-monte-carlo-simulation-using-mc2d>
on-using-mc2d
Might anyone here have a suggestion for how to address the error?
My approach is largely based on this advice:
http://r-sig-geo.2731867.n2.nabble.com/apply-monte-carlo-simulation-for-each <http://r-sig-geo.2731867.n2.nabble.com/apply-monte-carlo-simulation-for-each-cell-in-a-matrix-originally-raster-td7367094.html#a7367555>
-cell-in-a-matrix-originally-raster-td7367094.html#a7367555
Thanks in advance for any suggestions,
Todd
--
Todd McDonnell
Research Scientist, Ph.D.
E&S Environmental Chemistry
2161 NW Fillmore Ave., Corvallis, OR
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--
Vijay Lulla, Ph.D.
Assistant Professor,
Dept. of Geography, IUPUI
425 University Blvd, CA-207C.
Indianapolis, IN-46202
vlulla at iupui.edu
<http://vijaylulla.com>
http://vijaylulla.com
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