[R-sig-Geo] MODIS package's runGdal() returns error: dataFormat='GTiff', format not supported

Hakim Abdi hakim.abdi at nateko.lu.se
Mon May 16 10:47:59 CEST 2016


Hi Alex,

The OS is a 64 bit Windows 7 as specified in the sessionInfo() output I
posted. When I upgraded QGIS, I did so by uninstalling the previous one and
reinstalling the new version. I'm not quite sure what it means to upgrade
GDAL since I installed it fresh with OSGeo4W. In R, I reinstall all the
packages I need fresh off the repository using the install.views command.

gdalDrivers() produces the output that's attached.

Cheers,

Hakim


On Wed, May 11, 2016 at 5:09 PM, Alex Mandel <tech_dev at wildintellect.com>
wrote:

> What operating system?
> When you upgraded QGIS did you also upgrade GDAL?
> When you upgraded R, did you update your packages (or rebuild any
> packages)?
>
> What do you get from the following command?
> gdalDrivers()
>
> Thanks,
> Alex
>
> On 05/02/2016 02:11 PM, Hakim Abdi wrote:
> > Hello everyone,
> >
> > I'm having problems with the MODIS package, specifically, the runGdal()
> > command after the recent update to R 3.2.5. The error I get is this:
> >
> > Error in runGdal(product = product, begin = dates$beginDOY, end =
> > dates$endDOY, : in argument dataFormat='GTiff', format not supported by
> > GDAL type: 'gdalWriteDriver()' (column 'name') to list available inputs
> >
> > I'm not quite sure why this is happening, and I haven't found a solution
> > online. Does anyone have an idea? The package was working fine before I
> > upgraded R from 3.1.1. to 3.2.5, QGIS from 2.12.3 to 2.14.1 and RStudio
> to
> > version 0.99.467.
> >
> > My details are below, thanks for the assistance:
> >
> > R version 3.2.5 (2016-04-14) -- "Very, Very Secure Dishes"
> > Copyright (C) 2016 The R Foundation for Statistical Computing
> > Platform: x86_64-w64-mingw32/x64 (64-bit)
> >
> > R is free software and comes with ABSOLUTELY NO WARRANTY.
> > You are welcome to redistribute it under certain conditions.
> > Type 'license()' or 'licence()' for distribution details.
> >
> > R is a collaborative project with many contributors.
> > Type 'contributors()' for more information and
> > 'citation()' on how to cite R or R packages in publications.
> >
> > Type 'demo()' for some demos, 'help()' for on-line help, or
> > 'help.start()' for an HTML browser interface to help.
> > Type 'q()' to quit R.
> >
> >> require(MODIS)
> > Loading required package: MODIS
> > Loading required package: raster
> > Loading required package: sp
> > MODIS_manual:
> >
> https://ivfl-rio.boku.ac.at/owncloud/public.php?service=files&t=660dc830afb091237cc40b3dea2fdf6b
> >
> > Attaching package: ‘MODIS’
> >
> > The following object is masked from ‘package:base’:
> >
> >     file.size
> >
> >> MODISoptions()
> > All suggested packages are installed
> > Detecting available write drivers!
> > Found: 64 candidate drivers, detecting file extensions...
> > 0 usable drivers detected!
> >
> > STORAGE:
> > _______________
> > localArcPath : C:/Users/Hakim/Documents/MODIS_ARC/
> > outDirPath   : C:/Users/Hakim/Documents/MODIS_ARC/PROCESSED/
> >
> >
> > DOWNLOAD:
> > _______________
> > MODISserverOrder : LPDAAC, LAADS
> > dlmethod         : auto
> > stubbornness     : 5
> >
> >
> > PROCESSING:
> > _______________
> > GDAL           : GDAL 2.0.2, released 2016/01/26
> > MRT            : Version 4.1 (March 2011)
> > pixelSize      : asIn
> > outProj        : GEOGRAPHIC
> > resamplingType : NN
> > dataFormat     : GTiff
> >
> >
> > DEPENDENCIES:
> > _______________
> >
> >> dates <- as.POSIXct( as.Date(c("01/01/2010","01/05/2016"),format =
> > "%d/%m/%Y") )
> >> dates <- transDate(dates[1],dates[2])
> >> product <- "MOD13Q1"
> >> bands <- "010"
> >> h = c("21","22")
> >> v = c("07","08")
> > *> runGdal(product=product,begin=dates$beginDOY,end = dates$endDOY,tileH
> =
> > h,tileV = v, SDSstring = bands, outProj="4326")*
> > *Error in runGdal(product = product, begin = dates$beginDOY, end =
> > dates$endDOY,  : **in argument dataFormat='GTiff', format not supported
> by
> > GDAL type: 'gdalWriteDriver()' (column 'name') to list available inputs*
> >> sessionInfo()
> > R version 3.2.5 (2016-04-14)
> > Platform: x86_64-w64-mingw32/x64 (64-bit)
> > Running under: Windows 7 x64 (build 7601) Service Pack 1
> >
> > locale:
> > [1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United
> > States.1252
> > [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
> >
> > [5] LC_TIME=English_United States.1252
> >
> > attached base packages:
> > [1] stats     graphics  grDevices utils     datasets  methods   base
> >
> > other attached packages:
> > [1] MODIS_0.10-34 raster_2.5-2  sp_1.2-3
> >
> > loaded via a namespace (and not attached):
> > [1] tools_3.2.5     Rcpp_0.12.4     grid_3.2.5      lattice_0.20-33
> >
> >
> >
> > __________________________________________________
> >
> > Hakim Abdi | PhD Candidate
> > Center for Geobiosphere Science
> >
> > Department of Physical Geography and Ecosystem Science
> > Lund University, Sölvegatan 12, SE-223 62 Lund, Sweden
> >
> >       [[alternative HTML version deleted]]
> >
> > _______________________________________________
> > R-sig-Geo mailing list
> > R-sig-Geo at r-project.org
> > https://stat.ethz.ch/mailman/listinfo/r-sig-geo
> >
>
>
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