[R-sig-Geo] library fails to load in linux
Rolf Turner
r.turner at auckland.ac.nz
Thu Jun 25 00:23:18 CEST 2015
How did you effect the installation command? Did you use
install.packages(.....)
from the R command line? Or did you use a precompiled Ubuntu binary? Or
....?
When I do
install.packages("spatstat", <etc.>)
from the R command line, under my antiquated Fedora system, it installs
with no problems.
Have you tried downloading the tarball and installing from source, i.e.
R CMD INSTALL spatstat_1.42-1.tar.gz
???
We need more detail. If there really is a problem, we need to get to
the bottom of it.
You might possibly get more help on the R-sig-Debian list; please keep
us informed of developments.
cheers,
Rolf Turner
On 25/06/15 01:39, Harold-Jeffrey Ship wrote:
> I have Ubuntu 12.04 Precise. I just installed R and want to install
> spatstat. This is the R information:
>
> R version 3.2.1 (2015-06-18) -- "World-Famous Astronaut"
> Copyright (C) 2015 The R Foundation for Statistical Computing
> Platform: x86_64-pc-linux-gnu (64-bit)
>
> When I try to install spatstat things look fine at first until it tries to
> verify the installation by loading the library. It crashes, with the below
> error message (snipped).
> Any help would be greatly appreciated!
>
> installing to /home/harold/R/x86_64-pc-linux-gnu-library/3.2/spatstat/libs
> ** R
> ** data
> *** moving datasets to lazyload DB
> ** demo
> ** inst
> ** byte-compile and prepare package for lazy loading
> ** help
> *** installing help indices
> ** building package indices
> ** installing vignettes
> ** testing if installed package can be loaded
> *** stack smashing detected ***: /usr/lib/R/bin/exec/R terminated
> ======= Backtrace: =========
> /lib/x86_64-linux-gnu/libc.so.6(__fortify_fail+0x37)[0x7f3895976e57]
> /lib/x86_64-linux-gnu/libc.so.6(__fortify_fail+0x0)[0x7f3895976e20]
> /usr/lib/R/lib/libR.so(+0xc9825)[0x7f3895f11825]
> [[alternative HTML version deleted]]
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