[R-sig-Geo] ROC or TSS?

Maurizio Marchi mauriziomarchi85 at gmail.com
Wed Oct 8 13:13:23 CEST 2014


Dear List Members,
I have some troubles with models evaluation. I'm using biomod2 package and
I'm comparing 7 models with an Evaluation dataset. I obtain very different
results between ROC and TSS as shown here:

> myBiomodModelEval["ROC","Evaluating.data",,,]
               RUN1  RUN2  RUN3  Full
GLM        0.642 0.651 0.673 0.654
GAM        0.522 0.493 0.495 0.509
GBM        0.582 0.576 0.580 0.581
ANN         0.760 0.613 0.671 0.801
MARS      0.902 0.892 0.898 0.902
RF            0.814 0.809 0.770 0.800
MAXENT 0.638 0.616 0.606 0.614

> myBiomodModelEval["TSS","Evaluating.data",,,]
                RUN1   RUN2   RUN3   Full
GLM        0.023  0.014  0.000  0.007
GAM       -0.093 -0.095 -0.095 -0.099
GBM         0.202 -0.134  0.244  0.204
ANN          0.386  0.311  0.257  0.469
MARS       0.614  0.402  0.608  0.634
RF            0.469  0.389  0.349  0.406
MAXENT  0.219  0.326  0.259  0.280

How good are my models? Should I use ROC or TSS?

Many thanks,

-- 
Maurizio Marchi, Ph.D. student
Florence, Italy
ID skype: maurizioxyz
Ubuntu 14.04 LTS
linux user 552742

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