[R-sig-Geo] Dramatically slow plotting

Rolando Valdez rvaldezr at gmail.com
Mon Mar 17 23:23:51 CET 2014


Hello, 

Recently, I acquired a MacBook Pro, Core i7, 8 GB ram. I Installed the newest R version, 3.0.3 from the web page. The problem is when I’m plotting maps, because is going very, very slow, about 3 or 4 minutes just for a single map, while I’ve done this in a few seconds in Windows with Core i5 and 4 GB ram.

This is what I have:

R version 3.0.3 (2014-03-06) -- "Warm Puppy"
Copyright (C) 2014 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin10.8.0 (64-bit)

[R.app GUI 1.63 (6660) x86_64-apple-darwin10.8.0]

I found a reproducible example in web and I took time with proc.time()

ptm <- proc.time()
library(sp)
library(lattice) # required for trellis.par.set():
trellis.par.set(sp.theme()) # sets color ramp to bpy.colors()

# prepare nc sids data set:
library(maptools)
nc <- readShapePoly(system.file("shapes/sids.shp", package="maptools")[1], proj4string=CRS("+proj=longlat +datum=NAD27"))
arrow = list("SpatialPolygonsRescale", layout.north.arrow(),
    offset = c(-76,34), scale = 0.5, which = 2)
#scale = list("SpatialPolygonsRescale", layout.scale.bar(),
#    offset = c(-77.5,34), scale = 1, fill=c("transparent","black"), which = 2)
#text1 = list("sp.text", c(-77.5,34.15), "0", which = 2)
#text2 = list("sp.text", c(-76.5,34.15), "1 degree", which = 2)
## multi-panel plot with filled polygons: North Carolina SIDS
spplot(nc, c("SID74", "SID79"), names.attr = c("1974","1979"),
    colorkey=list(space="bottom"), scales = list(draw = TRUE),
    main = "SIDS (sudden infant death syndrome) in North Carolina",
    sp.layout = list(arrow), as.table = TRUE)

#    sp.layout = list(arrow, scale, text1, text2), as.table = TRUE)
proc.time() - ptm

user  system elapsed 
  2.408   0.064   2.616

It was quick.

Then I did a single plot with my shape:

mapa <- readShapePoly(“Entidades_2013.shp”)
ptm <- proc.time()
spplot(mapa[1]); proc.time() - ptm

user  system elapsed 
 87.575   0.786  88.068

Why it take a lot of time? I worked with same shapes in Windows and never took that time.

Hope you can help me,

Regards,

Rolando Valdez



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