[R-sig-Geo] Broken conversion from sp to spatstat ppp
d.g.rossiter at utwente.nl
d.g.rossiter at utwente.nl
Tue Jun 18 08:40:17 CEST 2013
Since upgrading to R 3.0.1 and the latest version of packages sp 1.0.9, gstat 1.0.16, spatstat 1.31-13 the following conversion no longer works:
> require(gstat)
> data(meuse)
> coordinates(meuse) <- ~x + y
> meuse.ppp <- as(meuse, "ppp")
Error message:
Error in as(ds, "ppp") :
no method or default for coercing "SpatialPointsDataFrame" to "ppp"
Trying another way:
…
> meuse.ppp <- as.ppp(meuse)
Gives a different error message:
Error in as.ppp.default(ds) : Can't interpret X as a point pattern
But I suppose these are at root the same problem.
I can get around this with:
> x <- coordinates(meuse)[,1]
> y <- coordinates(meuse)[,2]
> l1 <- bbox(meuse)[1,1]
> l2 <- bbox(meuse)[1,2]
> l3 <- bbox(meuse)[2,1]
> l4 <- bbox(meuse)[2,2]
> win <- owin(xrange=c(l1,l2), yrange=c(l3,l4))
> class(win)
[1] "owin"
> win
window: rectangle = [178605, 181390] x [329714, 333611] units
> meuse.ppp <- ppp(x, y, window=win, marks=meuse at data)
> plot(meuse.ppp, which.marks="ffreq")
So it seems the conversion routine should be easy to implement or adjust to whatever has changed in R 3.0.
D G Rossiter
Senior University Lecturer
Faculty of Geoinformation and Earth Observation Science
Universiteit Twente.
Enschede (NL)
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