[R-sig-Geo] small improvement for saveDataset() in rgdal
Roger Bivand
Roger.Bivand at nhh.no
Tue Dec 18 10:53:13 CET 2012
Seb,
Thanks for a helpful example and patch - committed in SVN revision 411.
Best wishes,
Roger
On Fri, 14 Dec 2012, Sebastian P. Luque wrote:
> Hi,
>
> Some time ago I spent several hours trying to figure out why the
> following was failing¹:
>
> library(rgdal); library(adehabitatHR)
> data(puechabonsp)
> locs <- puechabonsp$relocs
> ## Estimation of UD for four animals
> (ud <- kernelUD(locs[, 1]))
> locs.gtiff <- create2GDAL(ud[[1]],
> drivername="GTiff")
> locs.aaigrid <- copyDataset(locs.gtiff,
> driver="AAIGrid")
> saveDataset(locs.aaigrid, "~/tmp/test.asc")
>
> which prints this:
>
> Error in .local(.Object, ...) : Dataset copy failed
>
> finding that this resulted from failure to expand the 'filename'
> argument in saveDataset(). Would it make sense to patch this function
> with:
>
> ---<--------------------cut here---------------start------------------->---
> *** /home/sluque/Scripts/R/src/rgdal/R/gdal.R 2012-12-14 15:05:25.000000000 -0600
> --- /home/sluque/Scripts/R/src/gdal.R 2012-12-14 15:05:11.000000000 -0600
> ***************
> *** 217,223 ****
> new.obj <- new(new.class,
> handle = .Call('RGDAL_CopyDataset',
> dataset, getDriver(dataset),
> ! FALSE, options, filename, PACKAGE="rgdal"))
>
> if (returnNewObj) return(new.obj)
> invisible(GDAL.close(new.obj))
> --- 217,223 ----
> new.obj <- new(new.class,
> handle = .Call('RGDAL_CopyDataset',
> dataset, getDriver(dataset),
> ! FALSE, options, normalizePath(filename), PACKAGE="rgdal"))
>
> if (returnNewObj) return(new.obj)
> invisible(GDAL.close(new.obj))
> ---<--------------------cut here---------------end--------------------->---
>
> ? It tests fine on my system:
>
> R> sessionInfo()
> R version 2.15.2 (2012-10-26)
> Platform: x86_64-pc-linux-gnu (64-bit)
>
> locale:
> [1] LC_CTYPE=en_CA.UTF-8 LC_NUMERIC=C LC_TIME=en_CA.UTF-8 LC_COLLATE=en_CA.UTF-8 LC_MONETARY=en_CA.UTF-8 LC_MESSAGES=en_CA.UTF-8
> [7] LC_PAPER=C LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
> other attached packages:
> [1] adehabitatHR_0.4.4 adehabitatLT_0.3.7 CircStats_0.2-4 boot_1.3-7 MASS_7.3-22 adehabitatMA_0.3.4 ade4_1.5-1 deldir_0.0-21 rgdal_0.7-25
> [10] sp_1.0-2 slmisc_0.9.3 latticeExtra_0.6-24 RColorBrewer_1.0-5 lattice_0.20-10
>
> loaded via a namespace (and not attached):
> [1] compiler_2.15.2 grid_2.15.2 tools_2.15.2
>
>
> Cheers,
>
> --
> Seb
>
> ¹ https://stat.ethz.ch/pipermail/r-sig-ecology/2012-March/002895.html
>
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--
Roger Bivand
Department of Economics, NHH Norwegian School of Economics,
Helleveien 30, N-5045 Bergen, Norway.
voice: +47 55 95 93 55; fax +47 55 95 95 43
e-mail: Roger.Bivand at nhh.no
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